RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PDCD7Q8N8D1 485 aaKnown RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 XXYLT1Q8NBI6 393 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ZSWIM2Q8NEG5 633 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 FIZ1Q96SL8 496 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PLIN4Q96Q06 1357 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ANKRD31Q8N7Z5 1873 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 MAGEB2O15479 319 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PLCB3Q01970 1234 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 RASIP1Q5U651 963 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ZBED8Q8IZ13 594 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 TTLL6Q8N841 843 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 CPA5Q8WXQ8 436 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 SH2D3AQ9BRG2 576 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 CADM1Q9BY67 442 aaKnown RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 HEY2Q9UBP5 337 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 GAKO14976 1311 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ZNF831Q5JPB2 1677 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 A0A1B0GVG6 124 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 LGR5O75473 907 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 IFNB1P01574 187 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 CD58P19256 250 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 SCNN1BP51168 640 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 FASTKD3Q14CZ7 662 aaKnown RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 PRAMEF18Q5VWM3 479 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ACAD10Q6JQN1 1059 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 APLFQ8IW19 511 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-201ENST00000334258 CRYGNQ8WXF5 182 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 MIPEPQ99797 713 aa14.51□□□□□ -0.09
SYNE3-201ENST00000334258 ADAMTSL1Q8N6G6 1762 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 NAV1Q8NEY1 1877 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 GOLGA8SH3BPF8 625 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 GOLGA8MH3BSY2 632 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 MAP3K7O43318 606 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 UBTFL6P0CB48 400 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ZSCAN5DPP0CG00 497 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 GCLCP48506 637 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-201ENST00000334258 SERPINB4P48594 390 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 KLF6Q99612 283 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-201ENST00000334258 OSBPL8Q9BZF1 889 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 KLHL11Q9NVR0 708 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 HSPBP1Q9NZL4 362 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 WDR35Q9P2L0 1181 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ANKFY1Q9P2R3 1169 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ZWINTO95229 277 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ADRA1DP25100 572 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ACSBG2Q5FVE4 666 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 LRRC74BQ6ZQY2 392 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 DENND1AQ8TEH3 1009 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 EPAS1Q99814 870 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 UBE4BO95155 1302 aa14.5□□□□□ -0.09
SYNE3-201ENST00000334258 DDX60LQ5H9U9 1706 aaKnown RBP14.5□□□□□ -0.09
SYNE3-201ENST00000334258 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TPD52L2O43399 206 aaKnown RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 EGFRP00533 1210 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 OATP04181 439 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ESRRAP11474 423 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ATF7P17544 494 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 NOP14P78316 857 aaKnown RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 GPS1Q13098 491 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CCDC62Q6P9F0 684 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CEP128Q6ZU80 1094 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CCNJLQ8IV13 435 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ANKMY2Q8IV38 441 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 NT5C1BQ96P26 610 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CSRNP1Q96S65 589 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 DDX50Q9BQ39 737 aaKnown RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 BTBD10Q9BSF8 475 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 C12orf65Q9H3J6 166 aaKnown RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ARL8BQ9NVJ2 186 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SENP1Q9P0U3 644 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ASB3Q9Y575 518 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 F5H6K3 240 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 C2CD2LO14523 706 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ZCCHC18P0CG32 403 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PRELPP51888 382 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CENPCQ03188 943 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SLC34A1Q06495 639 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 MTM1Q13496 603 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SLC9A9Q8IVB4 645 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ZCCHC9Q8N567 271 aaKnown RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TAB3Q8N5C8 712 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ARL10Q8N8L6 244 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 RFWD2Q8NHY2 731 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SPIRE2Q8WWL2 714 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ACCSQ96QU6 501 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 LXNQ9BS40 222 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TRIM55Q9BYV6 548 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TMEM206Q9H813 350 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 SAR1AQ9NR31 198 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 WRAP73Q9P2S5 460 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 PI4K2BG5E9Z4 385 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 P4HA2O15460 535 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 TPP2P29144 1249 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-201ENST00000334258 CIITAP33076 1130 aa14.49□□□□□ -0.09
SYNE3-201ENST00000334258 ARSEP51690 589 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms