RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 RBM41Q96IZ5 413 aaKnown RBP19.51■□□□□ 0.71
LRP3-201ENST00000253193 PPP1R16BQ96T49 567 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 CALN1Q9BXU9 219 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 C17orf75Q9HAS0 396 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 DONSONQ9NYP3 566 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 SAE1Q9UBE0 346 aaPredicted RBP19.51■□□□□ 0.71
LRP3-201ENST00000253193 PNMA3Q9UL41 463 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 CENPCQ03188 943 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 CCNG2Q16589 344 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 MFSD7Q6UXD7 560 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 DDX1Q92499 740 aaKnown RBP19.51■□□□□ 0.71
LRP3-201ENST00000253193 KLF6Q99612 283 aaPredicted RBP19.51■□□□□ 0.71
LRP3-201ENST00000253193 DEFB129Q9H1M3 183 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 ST6GALNAC4Q9H4F1 302 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 TRABDQ9H4I3 376 aa19.51■□□□□ 0.71
LRP3-201ENST00000253193 A8MUI8 341 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 F8VP50 259 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 PLSCR1O15162 318 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 PSMA2P25787 234 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 BASP1P80723 227 aaKnown RBP19.5■□□□□ 0.71
LRP3-201ENST00000253193 OR5B17Q8NGF7 314 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 PYROXD1Q8WU10 500 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 IVNS1ABPQ9Y6Y0 642 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 FAM47DPA6NHR8 397 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 MGRN1O60291 552 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 GHRP10912 638 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 SIX1Q15475 284 aaPredicted RBP19.5■□□□□ 0.71
LRP3-201ENST00000253193 CEP128Q6ZU80 1094 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 TMEM35BQ8NCS4 154 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 GPRASP2Q96D09 838 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 COQ4Q9Y3A0 265 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 UMODL1Q5DID0 1318 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 INO80B-WBP1J3KQ70 363 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 ORC1Q13415 861 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 CENPUQ71F23 418 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 ZNF606Q8WXB4 792 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 INO80BQ9C086 356 aaPredicted RBP19.5■□□□□ 0.71
LRP3-201ENST00000253193 TRIM33Q9UPN9 1127 aa19.5■□□□□ 0.71
LRP3-201ENST00000253193 TRIM72Q6ZMU5 477 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 GBP7Q8N8V2 638 aaPredicted RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 DDX27Q96GQ7 796 aaKnown RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 PLCD4Q9BRC7 762 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 MAK16Q9BXY0 300 aaKnown RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 AVENQ9NQS1 362 aaPredicted RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 KCNG1Q9UIX4 513 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 TBC1D12O60347 775 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 LDHAP00338 332 aaKnown RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 TBXAS1P24557 533 aaPredicted RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 SPARCL1Q14515 664 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 GPAT2Q6NUI2 795 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 KIF9Q9HAQ2 790 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 DCTN4Q9UJW0 460 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 NUB1Q9Y5A7 615 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 NOP56O00567 594 aaKnown RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 UNGP13051 313 aaPredicted RBP19.49■□□□□ 0.71
LRP3-201ENST00000253193 ZACNQ401N2 412 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 PIGWQ7Z7B1 504 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 MIEF2Q96C03 454 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 MTMR12Q9C0I1 747 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 XPNPEP1Q9NQW7 623 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 AAASQ9NRG9 546 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 NRBP2Q9NSY0 501 aa19.49■□□□□ 0.71
LRP3-201ENST00000253193 PSTPIP1O43586 416 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 EGFRP00533 1210 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 PECAM1P16284 738 aaPredicted RBP19.48■□□□□ 0.71
LRP3-201ENST00000253193 COPS2P61201 443 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 STXBP2Q15833 593 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 RFX6Q8HWS3 928 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 RCOR2Q8IZ40 523 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 AGBL3Q8NEM8 1001 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 KCNV2Q8TDN2 545 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 HSPH1Q92598 858 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 NLRP4Q96MN2 994 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 ZC3H11AO75152 810 aaKnown RBP eCLIP19.48■□□□□ 0.71
LRP3-201ENST00000253193 BANF1O75531 89 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 DNAJC8O75937 253 aaPredicted RBP19.48■□□□□ 0.71
LRP3-201ENST00000253193 PSEN1P49768 467 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 NCAPG2Q86XI2 1143 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 CTAGE3PQ8IX95 158 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 C7orf43Q8WVR3 580 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 ERP27Q96DN0 273 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
LRP3-201ENST00000253193 ACAD9Q9H845 621 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 SLC24A3Q9HC58 644 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 ARFGEF1Q9Y6D6 1849 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 CFAP73A6NFT4 308 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 PIK3R2O00459 728 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 MFSD5Q6N075 450 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.48■□□□□ 0.71
LRP3-201ENST00000253193 ASAP3Q8TDY4 903 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 IQCGQ9H095 443 aaKnown RBP19.48■□□□□ 0.71
LRP3-201ENST00000253193 MYPNQ86TC9 1320 aa19.48■□□□□ 0.71
LRP3-201ENST00000253193 NQO1P15559 274 aaKnown RBP19.47■□□□□ 0.71
LRP3-201ENST00000253193 TCF4P15884 667 aa19.47■□□□□ 0.71
LRP3-201ENST00000253193 VSTM1Q6UX27 236 aa19.47■□□□□ 0.71
LRP3-201ENST00000253193 SAMD3Q8N6K7 520 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms