RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 TCTN1Q2MV58 587 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 C10orf76Q5T2E6 689 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 SPOPLQ6IQ16 392 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 PPP1R2P3Q6NXS1 205 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 COLGALT2Q8IYK4 626 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 LRRC43Q8N309 656 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 KAT5Q92993 513 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 NHEJ1Q9H9Q4 299 aaPredicted RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 LUC7LQ9NQ29 371 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 TBC1D13Q9NVG8 400 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
LSM8-201ENST00000249299 AJAP1Q9UKB5 411 aaPredicted RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 BARX2Q9UMQ3 279 aaPredicted RBP13.84□□□□□ -0.19
LSM8-201ENST00000249299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
LSM8-201ENST00000249299 ATP8B3O60423 1300 aa13.83□□□□□ -0.19
LSM8-201ENST00000249299 ANK1P16157 1881 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 TTC3P53804 2025 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 EIF3CLB5ME19 914 aaKnown RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 RBAK-RBAKDNI3L0D1 243 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 CILPO75339 1184 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 POMCP01189 267 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 FGFR1P11362 822 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 GUCY2FP51841 1108 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 WDR5P61964 334 aaKnown RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 KRT83P78385 493 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 RNASELQ05823 741 aaKnown RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 GOLGA8FQ08AF8 430 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 GOLGA8DPQ0D2H9 430 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 ASTE1Q2TB18 679 aaPredicted RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 E4F1Q66K89 784 aaPredicted RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 ZNF689Q96CS4 500 aaPredicted RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 FAM84AQ96KN4 292 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 EIF3CQ99613 913 aaKnown RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 SYT11Q9BT88 431 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 PCDHB4Q9Y5E5 795 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 SNX9Q9Y5X1 595 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 NR2E3Q9Y5X4 410 aa13.83□□□□□ -0.2
LSM8-201ENST00000249299 EPN1Q9Y6I3 576 aaPredicted RBP13.83□□□□□ -0.2
LSM8-201ENST00000249299 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 M0QZQ0 153 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 HUS1O60921 280 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 B3GAT3O94766 335 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 NDUFA10O95299 355 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 ALDH2P05091 517 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CYP11A1P05108 521 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CYP11B1P15538 503 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CLCN1P35523 988 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 PDE6CP51160 858 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CLCNKBP51801 687 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 ELAVL2Q12926 359 aaKnown RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 STILQ15468 1287 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 SLC18A3Q16572 532 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 TMEM270Q6UE05 265 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 ZNF662Q6ZS27 426 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 ZSCAN30Q86W11 494 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CMTR2Q8IYT2 770 aaKnown RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 C7orf61Q8IZ16 206 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 EPS8L1Q8TE68 723 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 BADQ92934 168 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 MMS19Q96T76 1030 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 CHP1Q99653 195 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 ARID3AQ99856 593 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
LSM8-201ENST00000249299 COLEC11Q9BWP8 271 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 DEF6Q9H4E7 631 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 HAUS4Q9H6D7 363 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
LSM8-201ENST00000249299 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 GABRDO14764 452 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 PPEF2O14830 753 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 CYP26A1O43174 497 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 AKR1B10O60218 316 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 CLSTN1O94985 981 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 GZMAP12544 262 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 KRT5P13647 590 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 TYMPP19971 482 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 WARSP23381 471 aaKnown RBP13.81□□□□□ -0.2
LSM8-201ENST00000249299 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
LSM8-201ENST00000249299 LHX1P48742 406 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 SPA17Q15506 151 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 TMEM240Q5SV17 173 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 SCARA3Q6AZY7 606 aa13.81□□□□□ -0.2
LSM8-201ENST00000249299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms