RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 SULT1E1P49888 294 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 CDR2LQ86X02 465 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 SPATA2LQ8IUW3 424 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 SPATA18Q8TC71 538 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 KATNAL1Q9BW62 490 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 HACD3Q9P035 362 aa12.09□□□□□ -0.47
NOD1-201ENST00000222823 CHORDC1Q9UHD1 332 aaPredicted RBP12.09□□□□□ -0.47
NOD1-201ENST00000222823 SREBF1P36956 1147 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 GRIK1P39086 918 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 LONRF1Q17RB8 773 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 OR2W6PQ8NHA6 318 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 DACT3Q96B18 629 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 EGFL8Q99944 293 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 CYP4F11Q9HBI6 524 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 SLC13A4Q9UKG4 626 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 FOXN3O00409 490 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 MEA1Q16626 185 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 IMPG1Q17R60 797 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 N4BP2L2Q92802 583 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 CCT8L2Q96SF2 557 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 PARK7Q99497 189 aaKnown RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 MOSPD1Q9UJG1 213 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 WNT7AO00755 349 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 DPYSL4O14531 572 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 POLE2P56282 527 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 IL17AQ16552 155 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 GPRC5AQ8NFJ5 357 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 NCLNQ969V3 563 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 FAM118BQ9BPY3 351 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 RSAD1Q9HA92 442 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 ADA2Q9NZK5 511 aa12.08□□□□□ -0.48
NOD1-201ENST00000222823 DBR1Q9UK59 544 aaKnown RBP12.08□□□□□ -0.48
NOD1-201ENST00000222823 C4orf33Q8N1A6 199 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ASAP3Q8TDY4 903 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 SNX19Q92543 992 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 MRPL40Q9NQ50 206 aaKnown RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 ARL2BPQ9Y2Y0 163 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 E2F6O75461 281 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ARP10275 920 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 CXorf38Q8TB03 319 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 SGSM3Q96HU1 749 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 RNF103-CHMP3A0A140T963 221 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 KLRC4O43908 158 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 RPS6KA5O75582 802 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 PYGBP11216 843 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 PCSK1P29120 753 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 CASP4P49662 377 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 EFTUD2Q15029 972 aaKnown RBP eCLIP12.07□□□□□ -0.487e-6■■■■■ 30.5
NOD1-201ENST00000222823 TMEM259Q4ZIN3 620 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 TTC23LQ6PF05 361 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 CBWD2Q8IUF1 395 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ST13P4Q8IZP2 240 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 RAET1EQ8TD07 263 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 NRBF2Q96F24 287 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 HPDLQ96IR7 371 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 DUSP10Q9Y6W6 482 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 CCL15-CCL14A0A0B4J2E2 113 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 AP3B1O00203 1094 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 CHN1P15882 459 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 PON1P27169 355 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 FOXD4Q12950 439 aaPredicted RBP12.07□□□□□ -0.48
NOD1-201ENST00000222823 MTM1Q13496 603 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 LAMC2Q13753 1193 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 CCL15Q16663 113 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 TAS2R42Q7RTR8 314 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
NOD1-201ENST00000222823 THAP2Q9H0W7 228 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms