RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 BADQ92934 168 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 HEXIM2Q96MH2 286 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 FAN1Q9Y2M0 1017 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 KIF11P52732 1056 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 KRT17Q04695 432 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 LRRC26Q2I0M4 334 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 COLEC11Q9BWP8 271 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 KANSL3Q9P2N6 904 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 POLIQ9UNA4 740 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 PCDHA13Q9Y5I0 950 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 PTK2Q05397 1052 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 SKIV2LQ15477 1246 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 CD302Q8IX05 232 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
SYNGAP1-207ENST00000628646 MACROD2A1Z1Q3 448 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 CPB1P15086 417 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 LPIN1Q14693 890 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 BRSK2Q8IWQ3 736 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 APBB2Q92870 758 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 INTS2Q9H0H0 1204 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 CNTNAP2Q9UHC6 1331 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 RHOXF2BP0C7M4 288 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 AMHR2Q16671 573 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 OLIG1Q8TAK6 271 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 RHOXF2Q9BQY4 288 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 GANQ9H2C0 597 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 FZD8Q9H461 694 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 A8MXQ7 604 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 CAND2O75155 1236 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 OAS2P29728 719 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 MARCH8Q5T0T0 291 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 RAB20Q9NX57 234 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 PCDHB12Q9Y5F1 795 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 THAP12O43422 761 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 GFPT2O94808 682 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 CHRNA1P02708 482 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 DNAJB2P25686 324 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 TAF6P49848 677 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 PDE6CP51160 858 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 TSPY1Q01534 308 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 NOMO2Q5JPE7 1267 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 MRPL9Q9BYD2 267 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 IFT122Q9HBG6 1241 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 TMEM8AQ9HCN3 771 aa13.3□□□□□ -0.28
SYNGAP1-207ENST00000628646 EFCAB14O75071 495 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 NACA2Q9H009 215 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 ASB7Q9H672 318 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 UMODL1Q5DID0 1318 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 PDGFRBP09619 1106 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 FGFR1P11362 822 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 TCP1P17987 556 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 DNA2P51530 1060 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 SGSM1Q2NKQ1 1148 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 APPL2Q8NEU8 664 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 CGRRF1Q99675 332 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 CEP72Q9P209 647 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 PLXNB2O15031 1838 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 LOC285556D6RIA3 1793 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 A0A0B4J269 797 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 MYBL2P10244 700 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 MICALL1Q8N3F8 863 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 SYN2Q92777 582 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 ELMO3Q96BJ8 720 aa13.29□□□□□ -0.28
SYNGAP1-207ENST00000628646 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 WEE2P0C1S8 567 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 PRLRP16471 622 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 POU5F1BQ06416 359 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 SV2CQ496J9 727 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 ZBTB41Q5SVQ8 909 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 TMC7Q7Z402 723 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
SYNGAP1-207ENST00000628646 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms