RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FAM155AB1AL88 458 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-206ENST00000619300 RAD51CO43502 376 aa20.31■□□□□ 0.84
PSPC1-206ENST00000619300 SPOPO43791 374 aa20.31■□□□□ 0.84
PSPC1-206ENST00000619300 ITGA4P13612 1032 aa20.31■□□□□ 0.84
PSPC1-206ENST00000619300 SSTR3P32745 418 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-206ENST00000619300 ZNF211Q13398 564 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-206ENST00000619300 EPB41L5Q9HCM4 733 aa20.31■□□□□ 0.84
PSPC1-206ENST00000619300 ADAM22Q9P0K1 906 aa20.31■□□□□ 0.84
PSPC1-206ENST00000619300 NXF1Q9UBU9 619 aaKnown RBP20.31■□□□□ 0.84
PSPC1-206ENST00000619300 PASKQ96RG2 1323 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CCDC66A2RUB6 948 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 HAS3O00219 553 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 SART1O43290 800 aaKnown RBP20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CYP2C9P11712 490 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 FGFR4P22455 802 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CTNNA2P26232 953 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 PSEN2P49810 448 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 GUCY2DQ02846 1103 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 TMEM62Q0P6H9 643 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 SREBF2Q12772 1141 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CRHR2Q13324 411 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 ZNF667Q5HYK9 610 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 SCARA5Q6ZMJ2 495 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 PPP1R13LQ8WUF5 828 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 CCDC102AQ96A19 550 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 ANAPC7Q9UJX3 599 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 POLIQ9UNA4 740 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 GINS2Q9Y248 185 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 PCDHA3Q9Y5H8 950 aa20.3■□□□□ 0.84
PSPC1-206ENST00000619300 ITGB3P05106 788 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 HOXA11P31270 313 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 ATICP31939 592 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 CTNNA1P35221 906 aaKnown RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 TNNT3P45378 269 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 MARCKSL1P49006 195 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 ADAM17P78536 824 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 C1QBPQ07021 282 aaKnown RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 TMEM132DQ14C87 1099 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 WDR72Q3MJ13 1102 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 ZNF394Q53GI3 561 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 C2CD6Q53TS8 623 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 BCO2Q9BYV7 579 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 ZMYND15Q9H091 742 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 VIPAS39Q9H9C1 493 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 CDHR5Q9HBB8 845 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 TLL2Q9Y6L7 1015 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 MROH7Q68CQ1 1323 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 A0A0U1RQG5 324 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 MYL3P08590 195 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 GRM5P41594 1212 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 PTP4A2Q12974 167 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 DCAF4L1Q3SXM0 396 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 RUFY4Q6ZNE9 571 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 PHLDB2Q86SQ0 1253 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 C11orf70Q9BRQ4 267 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 DDX47Q9H0S4 455 aaKnown RBP20.29■□□□□ 0.84
PSPC1-206ENST00000619300 C2CD2Q9Y426 696 aa20.29■□□□□ 0.84
PSPC1-206ENST00000619300 MYO1FO00160 1098 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 LSM8O95777 96 aaKnown RBP20.28■□□□□ 0.84
PSPC1-206ENST00000619300 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
PSPC1-206ENST00000619300 BEX3Q00994 111 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 HIC1Q14526 733 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 PCBP1Q15365 356 aaKnown RBP eCLIP20.28■□□□□ 0.84
PSPC1-206ENST00000619300 CATSPER4Q7RTX7 472 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 APBB1IPQ7Z5R6 666 aaPredicted RBP20.28■□□□□ 0.84
PSPC1-206ENST00000619300 CPNE8Q86YQ8 564 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 CD302Q8IX05 232 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 PLEKHA4Q9H4M7 779 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 SLITRK6Q9H5Y7 841 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 VRTNQ9H8Y1 702 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 MRPL47Q9HD33 250 aaKnown RBP20.28■□□□□ 0.84
PSPC1-206ENST00000619300 KAT6AQ92794 2004 aa20.28■□□□□ 0.84
PSPC1-206ENST00000619300 EPHB4P54760 987 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 GPS2Q13227 327 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 MAMLD1Q13495 774 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 PPP2R5EQ16537 467 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 LLGL2Q6P1M3 1020 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 MMS22LQ6ZRQ5 1243 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 NT5DC4Q86YG4 428 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 GDAP1L1Q96MZ0 367 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 TRIM7Q9C029 511 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 ZNF518BQ9C0D4 1074 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 NR2E1Q9Y466 385 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 ZSCAN5CA6NGD5 496 aaPredicted RBP20.27■□□□□ 0.84
PSPC1-206ENST00000619300 PYGMP11217 842 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 DARSP14868 501 aaKnown RBP20.27■□□□□ 0.84
PSPC1-206ENST00000619300 MMP8P22894 467 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 CTGFP29279 349 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 SLC1A1P43005 524 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 TM4SF4P48230 202 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 CARSP49589 748 aaKnown RBP20.27■□□□□ 0.84
PSPC1-206ENST00000619300 PLEKHA7Q6IQ23 1121 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 EMBQ6PCB8 327 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 MAATS1Q7Z4T9 603 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 TMEM130Q8N3G9 435 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 TMEM35BQ8NCS4 154 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 CCDC26Q8TAB7 109 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 DNAJB3Q8WWF6 145 aa20.27■□□□□ 0.84
PSPC1-206ENST00000619300 TFAP2BQ92481 460 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms