RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 NEDD1Q8NHV4 660 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 PHF21AQ96BD5 680 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 hCG_2014768A0A024R1R8 64 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 KRT87PA6NCN2 255 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 SPTLC1O15269 473 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 ZC3H11AO75152 810 aaKnown RBP eCLIP19.6■□□□□ 0.73
GABPB1-212ENST00000615671 ITGB3P05106 788 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 AP2B1P63010 937 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 SHC4Q6S5L8 630 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 RNPC3Q96LT9 517 aaKnown RBP19.6■□□□□ 0.73
GABPB1-212ENST00000615671 TBL3Q12788 808 aaKnown RBP19.6■□□□□ 0.73
GABPB1-212ENST00000615671 CINPQ9BW66 212 aaPredicted RBP19.6■□□□□ 0.73
GABPB1-212ENST00000615671 USP27XA6NNY8 438 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 DCP1BQ8IZD4 617 aaKnown RBP19.6■□□□□ 0.73
GABPB1-212ENST00000615671 MAN1C1Q9NR34 630 aa19.6■□□□□ 0.73
GABPB1-212ENST00000615671 C19orf81C9J6K1 198 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 PGK2P07205 417 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 ENO3P13929 434 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 LIMA1Q9UHB6 759 aaKnown RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 RALBP11234 206 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 NCALDP61601 193 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 CD4P01730 458 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 GTF2H1P32780 548 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 FRMD5Q7Z6J6 570 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 OOSP2Q86WS3 158 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 ATG4CQ96DT6 458 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 HES6Q96HZ4 224 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 TAAR1Q96RJ0 339 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 YME1L1Q96TA2 773 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 SPATA16Q9BXB7 569 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 MAP3K13O43283 966 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 DGAT1O75907 488 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 CCDC159P0C7I6 412 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 HOXA7P31268 230 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 ZNF543Q08ER8 600 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 RFFLQ8WZ73 363 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 KAT2BQ92831 832 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 NPHS2Q9NP85 383 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 DBR1Q9UK59 544 aaKnown RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 CHMP2BQ9UQN3 213 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 CDK12Q9NYV4 1490 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 MTF1Q14872 753 aa19.59■□□□□ 0.73
GABPB1-212ENST00000615671 ZC3H15Q8WU90 426 aaKnown RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 FAM32AQ9Y421 112 aaKnown RBP19.59■□□□□ 0.73
GABPB1-212ENST00000615671 TNS3Q68CZ2 1445 aa19.58■□□□□ 0.73
GABPB1-212ENST00000615671 MAP3K6O95382 1288 aa19.58■□□□□ 0.73
GABPB1-212ENST00000615671 MBL2P11226 248 aaPredicted RBP19.58■□□□□ 0.73
GABPB1-212ENST00000615671 SGSM1Q2NKQ1 1148 aa19.58■□□□□ 0.73
GABPB1-212ENST00000615671 STX19Q8N4C7 294 aa19.58■□□□□ 0.73
GABPB1-212ENST00000615671 GUCA1CO95843 209 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 VTNP04004 478 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 SARM1Q6SZW1 724 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 RCOR2Q8IZ40 523 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 FMR1NBQ8N0W7 255 aaPredicted RBP19.58■□□□□ 0.72
GABPB1-212ENST00000615671 INPP5DQ92835 1189 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 MRPL40Q9NQ50 206 aaKnown RBP19.58■□□□□ 0.72
GABPB1-212ENST00000615671 SPASTQ9UBP0 616 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 APEX2Q9UBZ4 518 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 MRPL42Q9Y6G3 142 aaKnown RBP19.58■□□□□ 0.72
GABPB1-212ENST00000615671 ADCY3O60266 1144 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 IL10P22301 178 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 ERAP2Q6P179 960 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 LAYNQ6UX15 382 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 C4orf33Q8N1A6 199 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 MIER2Q8N344 545 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 UBXN8O00124 270 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 MAPK9P45984 424 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 KLK7P49862 253 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 HPCAP84074 193 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 GJB7Q6PEY0 223 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 NT5C1AQ9BXI3 368 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 SLC38A7Q9NVC3 462 aa19.58■□□□□ 0.72
GABPB1-212ENST00000615671 CRB1P82279 1406 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ZNF614Q8N883 585 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 KLF6Q99612 283 aaPredicted RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ISCA1Q9BUE6 129 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 SMARCAL1Q9NZC9 954 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ZC3H7BQ9UGR2 993 aaKnown RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 CRLS1Q9UJA2 301 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 RHOBTB1O94844 696 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 GPAT2Q6NUI2 795 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 CYGBQ8WWM9 190 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 TAF1DQ9H5J8 278 aaPredicted RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ALDH1A2O94788 518 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 MOV10L1Q9BXT6 1211 aaKnown RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 CATSPERBQ9H7T0 1116 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ZC4H2Q9NQZ6 224 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ATP2C1P98194 919 aaPredicted RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ALDH6A1Q02252 535 aaKnown RBP19.57■□□□□ 0.72
GABPB1-212ENST00000615671 NR1H3Q13133 447 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 TEDDM1Q5T9Z0 273 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
GABPB1-212ENST00000615671 ATP8B1O43520 1251 aa19.56■□□□□ 0.72
GABPB1-212ENST00000615671 AKAP10O43572 662 aa19.56■□□□□ 0.72
GABPB1-212ENST00000615671 FDX1P10109 184 aa19.56■□□□□ 0.72
GABPB1-212ENST00000615671 PLEKHM3Q6ZWE6 761 aa19.56■□□□□ 0.72
GABPB1-212ENST00000615671 MIB1Q86YT6 1006 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms