RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 NOTCH4Q99466 2003 aa13.81□□□□□ -0.2
CD9-212ENST00000610354 MUC3AQ02505 3323 aa13.81□□□□□ -0.2
CD9-212ENST00000610354 KIAA0391O15091 583 aaKnown RBP13.8□□□□□ -0.2
CD9-212ENST00000610354 CYP2J2P51589 502 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 LILRA4P59901 499 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 PNOCQ13519 176 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 PDXDC1Q6P996 788 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 ANKS3Q6ZW76 656 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
CD9-212ENST00000610354 OR5B17Q8NGF7 314 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 PLEKHO2Q8TD55 490 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
CD9-212ENST00000610354 SENP8Q96LD8 212 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 PHF7Q9BWX1 381 aaPredicted RBP13.8□□□□□ -0.2
CD9-212ENST00000610354 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
CD9-212ENST00000610354 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 ZNF233A6NK53 670 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 ZMYND10O75800 440 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
CD9-212ENST00000610354 ROR1Q01973 937 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 KCNB1Q14721 858 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 PLEKHA4Q9H4M7 779 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
CD9-212ENST00000610354 DOCK8Q8NF50 2099 aa13.79□□□□□ -0.2
CD9-212ENST00000610354 WDR27A2RRH5 827 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 ABLIM3O94929 683 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 OAZ2O95190 189 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 VNN2O95498 520 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 MTHFRP42898 656 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 SNRNP35Q16560 246 aaKnown RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 CES5AQ6NT32 575 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 DSTYKQ6XUX3 929 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 HOMEZQ8IX15 550 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 SPATA20Q8TB22 786 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 ZNF516Q92618 1163 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 RPGRIP1Q96KN7 1286 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 POP1Q99575 1024 aaKnown RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 EPHX3Q9H6B9 360 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 INTS13Q9NVM9 706 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 CGNQ9P2M7 1197 aaKnown RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 MAPK8IP1Q9UQF2 711 aa13.78□□□□□ -0.2
CD9-212ENST00000610354 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
CD9-212ENST00000610354 H7C4K7 107 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 PDXKO00764 312 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 SEC24AO95486 1093 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 ITGB3P05106 788 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 CYP11A1P05108 521 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 TYMPP19971 482 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 SP100P23497 879 aaPredicted RBP13.77□□□□□ -0.21
CD9-212ENST00000610354 POLR2BP30876 1174 aaKnown RBP13.77□□□□□ -0.21
CD9-212ENST00000610354 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
CD9-212ENST00000610354 CASP4P49662 377 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 PSMD6Q15008 389 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 ATAT1Q5SQI0 421 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 C15orf39Q6ZRI6 1047 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 HS2ST1Q7LGA3 356 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
CD9-212ENST00000610354 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 TMEM174Q8WUU8 243 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 MFSD14AQ96MC6 490 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 RIPOR3Q96MK2 946 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 TIGD1Q96MW7 591 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 TMEM209Q96SK2 561 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 RTP3Q9BQQ7 232 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 RHOBTB2Q9BYZ6 727 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 MTMR12Q9C0I1 747 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 KIAA1586Q9HCI6 787 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 AGAP1Q9UPQ3 857 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 PCDHA5Q9Y5H7 936 aa13.77□□□□□ -0.21
CD9-212ENST00000610354 C2CD4DB7Z1M9 353 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
CD9-212ENST00000610354 C8AP07357 584 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 OR4Q2P0C623 313 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 TAF6P49848 677 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 ARPP19P56211 112 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 RNF135Q8IUD6 432 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 GUF1Q8N442 669 aaKnown RBP13.76□□□□□ -0.21
CD9-212ENST00000610354 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 CACTINQ8WUQ7 758 aaKnown RBP13.76□□□□□ -0.21
CD9-212ENST00000610354 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms