RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 GCFC2P16383 781 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 PAX7P23759 505 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 PLA2G5P39877 138 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 ARL4AP40617 200 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 GSK3AP49840 483 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 USP14P54578 494 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 GRIK3Q13003 919 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 MORC3Q14149 939 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 MUM1Q2TAK8 710 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 SULT6B1Q6IMI4 303 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 NLRX1Q86UT6 975 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 TRMT2AQ8IZ69 625 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 PPM1NQ8N819 430 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 CD99L2Q8TCZ2 262 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 DIS3LQ8TF46 1054 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 TCP11Q8WWU5 503 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 IL17RAQ96F46 866 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 RBM17Q96I25 401 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 FAM193BQ96PV7 902 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 EIF3CQ99613 913 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 ACO2Q99798 780 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 KCTD10Q9H3F6 313 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 VEZTQ9HBM0 779 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 PRDM7Q9NQW5 492 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 SPATS2LQ9NUQ6 558 aaKnown RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 MTMR10Q9NXD2 777 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 NUMBLQ9Y6R0 609 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 UBR2Q8IWV8 1755 aa6.48□□□□□ -1.37
SMAD4-208ENST00000589706 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-208ENST00000589706 HEG1Q9ULI3 1381 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SYCE3A1L190 88 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ZC3H12DA2A288 527 aaKnown RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 CREB3O43889 395 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ADCY5O95622 1261 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PRLP01236 227 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PRNPP04156 253 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PNMA6AP0CW24 399 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PDCP20941 246 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 AOAHP28039 575 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ABCD1P33897 745 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PIP4K2AP48426 406 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 INHBEP58166 350 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ERVFC1P60507 584 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SLC6A3Q01959 620 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 DBPQ10586 325 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 MYBPC3Q14896 1274 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 UAP1L1Q3KQV9 507 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SLC9C1Q4G0N8 1177 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TIGD5Q53EQ6 642 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 HSP90B2PQ58FF3 399 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 C10orf62Q5T681 223 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PRAMEF9Q5VWM5 478 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 KIAA1841Q6NSI8 718 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 FBXO38Q6PIJ6 1188 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SLC23A3Q6PIS1 610 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 GBP6Q6ZN66 633 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SRGAP1Q7Z6B7 1085 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TADA2BQ86TJ2 420 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ANKRD18AQ8IVF6 992 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 GRAMD1CQ8IYS0 662 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 LILRA2Q8N149 483 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 SDR16C5Q8N3Y7 309 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 CCDC26Q8TAB7 109 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 COA7Q96BR5 231 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 FAM122AQ96E09 287 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 STRBPQ96SI9 672 aaKnown RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 MAP3K14Q99558 947 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 FOXB1Q99853 325 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TRIM6Q9C030 488 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 PRDM12Q9H4Q4 367 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TTC12Q9H892 705 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 IFT122Q9HBG6 1241 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TNFRSF12AQ9NP84 129 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 KCND1Q9NSA2 647 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 HOMER3Q9NSC5 361 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 GGA3Q9NZ52 723 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 BTBD7Q9P203 1132 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 CPSF2Q9P2I0 782 aaKnown RBP6.47□□□□□ -1.37
SMAD4-208ENST00000589706 CLIP2Q9UDT6 1046 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 LCMT1Q9UIC8 334 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 TMPRSS11EQ9UL52 423 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ATP6V0A2Q9Y487 856 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 NR2E3Q9Y5X4 410 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 IL16Q14005 1332 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 ZNF521Q96K83 1311 aa6.47□□□□□ -1.37
SMAD4-208ENST00000589706 A0A1B0GUA9 196 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 A6NNZ2 444 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 PSMD14O00487 310 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 CYBBP04839 570 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 MYBP10242 640 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 RHCEP18577 417 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 FUT4P22083 530 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms