RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SYTL1Q8IYJ3 562 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 TXLNBQ8N3L3 684 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 IQCDQ96DY2 449 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 JKAMPQ9P055 326 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 OAZ3Q9UMX2 235 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 HAUS5O94927 633 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 AGFG2O95081 481 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 PPM1FP49593 454 aaPredicted RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 ATP2B3Q16720 1220 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 CCDC38Q502W7 563 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 LDHAL6AQ6ZMR3 332 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 DNAJC5GQ8N7S2 189 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 BRI3BPQ8WY22 251 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 RAPGEF4Q8WZA2 1011 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 CCT6BQ92526 530 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 ARL8AQ96BM9 186 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 NEIL1Q96FI4 390 aaPredicted RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 ZNF512Q96ME7 567 aaPredicted RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 SCLT1Q96NL6 688 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 TINAGL1Q9GZM7 467 aaPredicted RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 SAGE1Q9NXZ1 904 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 MYO1AQ9UBC5 1043 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 MAN2B2Q9Y2E5 1009 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 PYCARD-AS1I3L0S3 204 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 NPHP1O15259 732 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 KIF20AO95235 890 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 SNRPA1P09661 255 aaKnown RBP6.93□□□□□ -1.3
UBR1-208ENST00000569066 EEF1GP26641 437 aaKnown RBP6.93□□□□□ -1.3
UBR1-208ENST00000569066 SLURP1P55000 103 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 CLRN1P58418 232 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 PTH1RQ03431 593 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 HSP90AB4PQ58FF6 505 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 PPM1EQ8WY54 764 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 FAM84AQ96KN4 292 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 PHACTR3Q96KR7 559 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 SELENOOQ9BVL4 669 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 TLR10Q9BXR5 811 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 TBKBP1A7MCY6 615 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 RFXAPO00287 272 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 HABP2Q14520 560 aaPredicted RBP6.93□□□□□ -1.3
UBR1-208ENST00000569066 UBXN2BQ14CS0 331 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 ZNF385BQ569K4 471 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 ELOA2Q8IYF1 753 aaPredicted RBP6.93□□□□□ -1.3
UBR1-208ENST00000569066 CPXCR1Q8N123 301 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 ZNF566Q969W8 418 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 KLHL32Q96NJ5 620 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 COLEC11Q9BWP8 271 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 CFAP97Q9P2B7 532 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 GRHPRQ9UBQ7 328 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 ITGB1BP2Q9UKP3 347 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 ADAMTS20P59510 1910 aa6.93□□□□□ -1.3
UBR1-208ENST00000569066 A0A087WZ62 844 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 hCG_1642624A0A1W2PR95 340 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 ADAMTS3O15072 1205 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 GNAI2P04899 355 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 GRPP07492 148 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 TECP42680 631 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 NSUN7Q8NE18 718 aaKnown RBP6.92□□□□□ -1.3
UBR1-208ENST00000569066 TFAP2CQ92754 450 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 TMEM41AQ96HV5 264 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 A0A087WWL8 130 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 AQP12BA6NM10 295 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 B5MCH6 92 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 VPS4BO75351 444 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 ANXA2P07355 339 aaKnown RBP6.92□□□□□ -1.3
UBR1-208ENST00000569066 CR2P20023 1033 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 CAP1Q01518 475 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 BMT2Q1RMZ1 405 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 ATG16L2Q8NAA4 619 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 PDPRQ8NCN5 879 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 TBC1D15Q8TC07 691 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 PLA2G12BQ9BX93 195 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 IMPG2Q9BZV3 1241 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 ZNF518BQ9C0D4 1074 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 CHST8Q9H2A9 424 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 SPON1Q9HCB6 807 aa6.92□□□□□ -1.3
UBR1-208ENST00000569066 VSX1Q9NZR4 365 aaPredicted RBP6.92□□□□□ -1.3
UBR1-208ENST00000569066 FAM234BA2RU67 622 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 SH3BP5O60239 455 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 PLA2G6O60733 806 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 PIM1P11309 404 aaPredicted RBP6.91□□□□□ -1.3
UBR1-208ENST00000569066 VEGFAP15692 232 aaPredicted RBP6.91□□□□□ -1.3
UBR1-208ENST00000569066 ALDH9A1P49189 494 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 ICA1Q05084 483 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 ATXN7L2Q5T6C5 722 aaPredicted RBP6.91□□□□□ -1.3
UBR1-208ENST00000569066 LMBRD2Q68DH5 695 aaPredicted RBP6.91□□□□□ -1.3
UBR1-208ENST00000569066 USP37Q86T82 979 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 SUGP1Q8IWZ8 645 aaKnown RBP6.91□□□□□ -1.3
UBR1-208ENST00000569066 MB21D1Q8N884 522 aa6.91□□□□□ -1.3
UBR1-208ENST00000569066 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms