RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TLR10Q9BXR5 811 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 DPH1Q9BZG8 443 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 CNNM1Q9NRU3 951 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 PIH1D1Q9NWS0 290 aaKnown RBP6.99□□□□□ -1.29
LINC00557-201ENST00000563184 STK32BQ9NY57 414 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
LINC00557-201ENST00000563184 AGAP1Q9UPQ3 857 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 MED16Q9Y2X0 877 aa6.99□□□□□ -1.29
LINC00557-201ENST00000563184 ZNF785A8K8V0 405 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 ZNF185O15231 689 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 CYP27B1O15528 508 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 DNAJB5O75953 348 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 ANXA1P04083 346 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 MYL3P08590 195 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 FCER1AP12319 257 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 PIK3CBP42338 1070 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 PARD3BQ8TEW8 1205 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 KBTBD7Q8WVZ9 684 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 MAML1Q92585 1016 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 SCAMP4Q969E2 229 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 LRRC27Q9C0I9 530 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 BTBD1Q9H0C5 482 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 NUP62CLQ9H1M0 184 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 DEF6Q9H4E7 631 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 MRPS18AQ9NVS2 196 aaKnown RBP6.98□□□□□ -1.29
LINC00557-201ENST00000563184 VSX1Q9NZR4 365 aaPredicted RBP6.98□□□□□ -1.29
LINC00557-201ENST00000563184 CPNE7Q9UBL6 633 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 PHTF1Q9UMS5 762 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 TCAF1Q9Y4C2 921 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 CHST2Q9Y4C5 530 aa6.98□□□□□ -1.29
LINC00557-201ENST00000563184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.98□□□□□ -1.29
LINC00557-201ENST00000563184 CKBP12277 381 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
LINC00557-201ENST00000563184 ZNF135P52742 658 aaPredicted RBP6.97□□□□□ -1.29
LINC00557-201ENST00000563184 SUMO3P55854 103 aaPredicted RBP6.97□□□□□ -1.29
LINC00557-201ENST00000563184 PICALMQ13492 652 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 CNGA2Q16280 664 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 RHOT2Q8IXI1 618 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 SLC17A8Q8NDX2 589 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 NUP133Q8WUM0 1156 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 PHKBQ93100 1093 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 MARS2Q96GW9 593 aaKnown RBP6.97□□□□□ -1.29
LINC00557-201ENST00000563184 TEX101Q9BY14 249 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 KLC2Q9H0B6 622 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 SMURF2Q9HAU4 748 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 KLHL11Q9NVR0 708 aa6.97□□□□□ -1.29
LINC00557-201ENST00000563184 AHRRA9YTQ3 701 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 ISM1B1AKI9 464 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 ABHD16AO95870 558 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 ACRV1P26436 265 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 TM4SF4P48230 202 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 RNASE9P60153 205 aaKnown RBP6.96□□□□□ -1.3
LINC00557-201ENST00000563184 FMO1Q01740 532 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 HDAC1Q13547 482 aaPredicted RBP6.96□□□□□ -1.3
LINC00557-201ENST00000563184 CDSNQ15517 529 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 C11orf96Q7Z7L8 435 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 SESTD1Q86VW0 696 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 AOPEPQ8N6M6 819 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 PCSK9Q8NBP7 692 aaKnown RBP6.96□□□□□ -1.3
LINC00557-201ENST00000563184 PDPRQ8NCN5 879 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 OR56A1Q8NGH5 318 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
LINC00557-201ENST00000563184 TBCBQ99426 244 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 IMPG2Q9BZV3 1241 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 TINAGL1Q9GZM7 467 aaPredicted RBP6.96□□□□□ -1.3
LINC00557-201ENST00000563184 KIAA1586Q9HCI6 787 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 SMPD4Q9NXE4 827 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.3
LINC00557-201ENST00000563184 PLSCR1O15162 318 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 PEX14O75381 377 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 BRAFP15056 766 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 KCNJ5P48544 419 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 ALDH5A1P51649 535 aaPredicted RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 TCF15Q12870 199 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 CRHR2Q13324 411 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 TOB2Q14106 344 aaPredicted RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 HABP2Q14520 560 aaPredicted RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 PDCD4Q53EL6 469 aaKnown RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 LRRC55Q6ZSA7 311 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 USP37Q86T82 979 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 CHST13Q8NET6 341 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 SRRDQ9UH36 339 aa6.95□□□□□ -1.3
LINC00557-201ENST00000563184 USP15Q9Y4E8 981 aaPredicted RBP6.95□□□□□ -1.3
LINC00557-201ENST00000563184 F8W8V4 182 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 UNC5CO95185 931 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 PRIM2P49643 509 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 PRKD1Q15139 912 aaPredicted RBP6.94□□□□□ -1.3
LINC00557-201ENST00000563184 LONRF1Q17RB8 773 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 TMPRSS6Q8IU80 811 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 SUCLG2Q96I99 432 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 ZSWIM1Q9BR11 485 aa6.94□□□□□ -1.3
LINC00557-201ENST00000563184 ZNF768Q9H5H4 540 aaKnown RBP6.94□□□□□ -1.3
LINC00557-201ENST00000563184 ZNF287Q9HBT7 754 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms