RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 SPATA6Q9NWH7 488 aaPredicted RBP20.48■□□□□ 0.87
CDKN3-209ENST00000556102 CEP72Q9P209 647 aa20.48■□□□□ 0.87
CDKN3-209ENST00000556102 FBXO4Q9UKT5 387 aa20.48■□□□□ 0.87
CDKN3-209ENST00000556102 TBX20Q9UMR3 447 aa20.48■□□□□ 0.87
CDKN3-209ENST00000556102 LACTBL1A8MY62 500 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 K7ENM7 598 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 OGTO15294 1046 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 LAMTOR5O43504 91 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 FAM189A1O60320 539 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 FAM13AO94988 1023 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 BMP15O95972 392 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 TARSP26639 723 aaKnown RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 EPHA5P54756 1037 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 FOXK2Q01167 660 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 ENOX2Q16206 610 aaKnown RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 ZNF528Q3MIS6 628 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 MYCT1Q8N699 235 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 RPF1Q9H9Y2 349 aaKnown RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 UPF2Q9HAU5 1272 aaKnown RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 ASAH2Q9NR71 780 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 HEBP1Q9NRV9 189 aa20.47■□□□□ 0.87
CDKN3-209ENST00000556102 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 TIMM13Q9Y5L4 95 aaPredicted RBP20.47■□□□□ 0.87
CDKN3-209ENST00000556102 ANK1P16157 1881 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 NRG2O14511 850 aaPredicted RBP20.46■□□□□ 0.87
CDKN3-209ENST00000556102 NCAM2O15394 837 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 MOSPD3O75425 235 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 ADRB2P07550 413 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 DHX8Q14562 1220 aaKnown RBP20.46■□□□□ 0.87
CDKN3-209ENST00000556102 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
CDKN3-209ENST00000556102 ZNF852Q6ZMS4 543 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 USP37Q86T82 979 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 RAD54LQ92698 747 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 CLDN23Q96B33 292 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 BRD9Q9H8M2 597 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 MRPS17Q9Y2R5 130 aaKnown RBP20.46■□□□□ 0.87
CDKN3-209ENST00000556102 YIPF1Q9Y548 306 aa20.46■□□□□ 0.87
CDKN3-209ENST00000556102 COL4A2P08572 1712 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 DCHS1Q96JQ0 3298 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 OR6C75A6NL08 312 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 TRAK2O60296 914 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 KRT18P05783 430 aaKnown RBP20.45■□□□□ 0.86
CDKN3-209ENST00000556102 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
CDKN3-209ENST00000556102 MYL4P12829 197 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 PLCG1P19174 1290 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 LONP1P36776 959 aaKnown RBP20.45■□□□□ 0.86
CDKN3-209ENST00000556102 ID4P47928 161 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 GUCY2FP51841 1108 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 GRM2Q14416 872 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 MCM6Q14566 821 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 DSTYKQ6XUX3 929 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 RASSF8Q8NHQ8 419 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 SMARCD2Q92925 531 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 MSTO1Q9BUK6 570 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 TRMT61BQ9BVS5 477 aaKnown RBP20.45■□□□□ 0.86
CDKN3-209ENST00000556102 TICRRQ7Z2Z1 1910 aa20.45■□□□□ 0.86
CDKN3-209ENST00000556102 A0A0B4J269 797 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
CDKN3-209ENST00000556102 VNN2O95498 520 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 OR4Q2P0C623 313 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 TYMPP19971 482 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 ABCD1P33897 745 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 RPS9P46781 194 aaKnown RBP20.44■□□□□ 0.86
CDKN3-209ENST00000556102 GRIN1Q05586 938 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 GPR17Q13304 367 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 PLD1Q13393 1074 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 KARSQ15046 597 aaKnown RBP20.44■□□□□ 0.86
CDKN3-209ENST00000556102 SPATA1Q5VX52 437 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 VITQ6UXI7 678 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 MAP4K3Q8IVH8 894 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 CD302Q8IX05 232 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 DEPDC1BQ8WUY9 529 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 IRF7Q92985 503 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 BORCS6Q96GS4 357 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 ZSWIM3Q96MP5 696 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 FIZ1Q96SL8 496 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 TRPV4Q9HBA0 871 aa20.44■□□□□ 0.86
CDKN3-209ENST00000556102 TSC2P49815 1807 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 SHISA7A6NL88 538 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 PPEF2O14830 753 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 TBCAO75347 108 aaKnown RBP20.43■□□□□ 0.86
CDKN3-209ENST00000556102 PSMC3P17980 439 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 PAX3P23760 479 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 GTF2BQ00403 316 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 MYBPC2Q14324 1141 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 OVOS1Q6IE37 1185 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 JADE1Q6IE81 842 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 SLC39A4Q6P5W5 647 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 LARP4BQ92615 738 aaKnown RBP20.43■□□□□ 0.86
CDKN3-209ENST00000556102 FAM212AQ96EL1 285 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 PGLYRP2Q96PD5 576 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 GPR88Q9GZN0 384 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 ZHX3Q9H4I2 956 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 ZNF334Q9HCZ1 680 aaPredicted RBP20.43■□□□□ 0.86
CDKN3-209ENST00000556102 TRPV5Q9NQA5 729 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 CPSF3Q9UKF6 684 aaKnown RBP20.43■□□□□ 0.86
CDKN3-209ENST00000556102 GPR179Q6PRD1 2367 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 SCN1AP35498 2009 aa20.43■□□□□ 0.86
CDKN3-209ENST00000556102 FRYLO94915 3013 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms