RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 UNC79Q9P2D8 2635 aa11.45□□□□□ -0.58
TMEM260-206ENST00000555046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 STX10O60499 249 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 B4GALT3O60512 393 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 KIF4AO95239 1232 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 EFEMP2O95967 443 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 NFICP08651 508 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 EPB41P11171 864 aaKnown RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 NR2F2P24468 414 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CCNE1P24864 410 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 KLRC2P26717 231 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 MCM4P33991 863 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 ID4P47928 161 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 SPAG1Q07617 926 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CYP24A1Q07973 514 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 KIAA0319Q5VV43 1072 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 PLPP4Q5VZY2 271 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 C9orf57Q5W0N0 161 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 DSTYKQ6XUX3 929 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 TMEM173Q86WV6 379 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
TMEM260-206ENST00000555046 EFHBQ8N7U6 833 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CCDC127Q96BQ5 260 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 ZNF560Q96MR9 790 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 GPR62Q9BZJ7 368 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 CXCL16Q9H2A7 254 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 IGFLR1Q9H665 355 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 PLSCR2Q9NRY7 297 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
TMEM260-206ENST00000555046 MYH15Q9Y2K3 1946 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 BIN1O00499 593 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 PIRO00625 290 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 MEFVO15553 781 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 LILRB3O75022 631 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 PHACTR2O75167 634 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 GNA14O95837 355 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 FAM163BP0C2L3 166 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 DLATP10515 647 aaKnown RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 HOXB8P17481 243 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 FGFR3P22607 806 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 IRS1P35568 1242 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 NRIP1P48552 1158 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 TAF6P49848 677 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 LILRA4P59901 499 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 TRPC3Q13507 836 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 DUSP6Q16828 381 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 SV2CQ496J9 727 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 ISM2Q6H9L7 571 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 TMEM184AQ6ZMB5 413 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 RTL10Q7L3V2 364 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 TAS1R1Q7RTX1 841 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 METTL23Q86XA0 190 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 LRRC52Q8N7C0 313 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 BCL7CQ8WUZ0 217 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 RIN2Q8WYP3 895 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 RABGGTAQ92696 567 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 CASP10Q92851 521 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 PABPC5Q96DU9 382 aaKnown RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 PAAF1Q9BRP4 392 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 RXFP1Q9HBX9 757 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 METTL14Q9HCE5 456 aaKnown RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 TUBGCP4Q9UGJ1 667 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 MAFFQ9ULX9 164 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
TMEM260-206ENST00000555046 EP300Q09472 2414 aaPredicted RBP11.43□□□□□ -0.58
TMEM260-206ENST00000555046 KPNA7A9QM74 516 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 M0QZQ0 153 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 C2CD2LO14523 706 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 SLC16A3O15427 465 aaKnown RBP11.42□□□□□ -0.58
TMEM260-206ENST00000555046 KRT19P08727 400 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 ODC1P11926 461 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-206ENST00000555046 TYMPP19971 482 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 GTF2H1P32780 548 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 VAMP7P51809 220 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 CLDN10P78369 228 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 HYAL1Q12794 435 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 PAK1Q13153 545 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 ADAM15Q13444 863 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 PTPN14Q15678 1187 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-206ENST00000555046 ANKRD40Q6AI12 368 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 SASS6Q6UVJ0 657 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
TMEM260-206ENST00000555046 FILIP1Q7Z7B0 1213 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms