RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 CYP3A43Q9HB55 503 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 IL23AQ9NPF7 189 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 TUBGCP4Q9UGJ1 667 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 SIX4Q9UIU6 781 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 PCDHB4Q9Y5E5 795 aa11.22□□□□□ -0.61
TMEM55B-205ENST00000554028 ANO9A1A5B4 782 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 ARHGEF37A1IGU5 675 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 CCDC85CA6NKD9 419 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 MEIS3P2A8K0S8 358 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 FOXN3O00409 490 aaPredicted RBP11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 PIRO00625 290 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 INPPL1O15357 1258 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 LRRN2O75325 713 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 BAIAP3O94812 1187 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 FGBP02675 491 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 KCNJ6P48051 423 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 JAM2P57087 298 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 PTK2Q05397 1052 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 FPGSQ05932 587 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 MEA1Q16626 185 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 SPOPLQ6IQ16 392 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 LINC01599Q8WXQ3 324 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 SHC3Q92529 594 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 DPF3Q92784 378 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM55B-205ENST00000554028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 SSU72P8A0A1W2PR75 194 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 PODXLO00592 558 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 CCP110O43303 1012 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 AKR1B10O60218 316 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 HUS1O60921 280 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 FGFR1P11362 822 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 FECHP22830 423 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 ANXA13P27216 316 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 SPA17Q15506 151 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 DSTYKQ6XUX3 929 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 FAM71AQ8IYT1 594 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 TXLNBQ8N3L3 684 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 KREMEN1Q96MU8 473 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 NHEJ1Q9H9Q4 299 aaPredicted RBP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 SNX9Q9Y5X1 595 aa11.2□□□□□ -0.62
TMEM55B-205ENST00000554028 CARNS1A5YM72 827 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 TRAPPC3O43617 180 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 B3GAT3O94766 335 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 UPP2O95045 317 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 ALDH2P05091 517 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 FAM163BP0C2L3 166 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CD58P19256 250 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 TNFAIP3P21580 790 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 ITGB8P26012 769 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 PRKCIP41743 596 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 PDE6CP51160 858 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 KRT83P78385 493 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CCZ1BP86790 482 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CCZ1P86791 482 aaPredicted RBP11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CLLU1OSQ5K130 101 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 WDR59Q6PJI9 974 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 TMEM270Q6UE05 265 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 IRF2BP2Q7Z5L9 587 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 APPL2Q8NEU8 664 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CXorf38Q8TB03 319 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 BADQ92934 168 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 KAT5Q92993 513 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CHP1Q99653 195 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 COLEC11Q9BWP8 271 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 SNX25Q9H3E2 840 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 GOLGA2P5Q9HBQ8 144 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 CISHQ9NSE2 258 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 GDAP2Q9NXN4 497 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 AJAP1Q9UKB5 411 aaPredicted RBP11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 ZKSCAN5Q9Y2L8 839 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 NR2E3Q9Y5X4 410 aa11.19□□□□□ -0.62
TMEM55B-205ENST00000554028 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
TMEM55B-205ENST00000554028 CYB561D2O14569 222 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms