RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TAF6P49848 677 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 LILRA4P59901 499 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SNRPFP62306 86 aaKnown RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ROR1Q01973 937 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 RAB33AQ14088 237 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ATAT1Q5SQI0 421 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 LILRA6Q6PI73 481 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 C15orf39Q6ZRI6 1047 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 USP37Q86T82 979 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 XXYLT1Q8NBI6 393 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 CMASQ8NFW8 434 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 GOLGA5Q8TBA6 731 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SLC7A14Q8TBB6 771 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 HDAC7Q8WUI4 952 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SMG7Q92540 1137 aaKnown RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 SENP8Q96LD8 212 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ZNF560Q96MR9 790 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ZDHHC7Q9NXF8 308 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
RAB5C-204ENST00000547517 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 PTPRJQ12913 1337 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 DENND4AQ7Z401 1863 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 C2orf16Q68DN1 1984 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 WDR27A2RRH5 827 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 EXOC3O60645 756 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 GADD45BO75293 160 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 ZMYND10O75800 440 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 C1RP00736 705 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 KRT19P08727 400 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 CPB1P15086 417 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 COL9A1P20849 921 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 MRPL58Q14197 206 aaKnown RBP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 KCNB1Q14721 858 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 SV2CQ496J9 727 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 ZNF707Q96C28 371 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-204ENST00000547517 ANKRD36BP1Q96IX9 119 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 PIDD1Q9HB75 910 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 MAPK8IP1Q9UQF2 711 aa12.77□□□□□ -0.37
RAB5C-204ENST00000547517 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 CCL16O15467 120 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
RAB5C-204ENST00000547517 KIF20AO95235 890 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 TNNC2P02585 160 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 NR3C1P04150 777 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 TYMPP19971 482 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 PNPLA4P41247 253 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 CYP24A1Q07973 514 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 BFSP1Q12934 665 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 SURF1Q15526 300 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 WDR49Q8IV35 697 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-204ENST00000547517 CSGALNACT2Q8N6G5 542 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 TDRD5Q8NAT2 981 aaKnown RBP12.76□□□□□ -0.37
RAB5C-204ENST00000547517 OR5B17Q8NGF7 314 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 ERCC4Q92889 916 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-204ENST00000547517 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 CGRRF1Q99675 332 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 POLIQ9UNA4 740 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 NR2E1Q9Y466 385 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 CLUHO75153 1309 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 SCN1AP35498 2009 aa12.76□□□□□ -0.37
RAB5C-204ENST00000547517 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 CYB561D2O14569 222 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 PRRG1O14668 218 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 OAZ2O95190 189 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 TNNI1P19237 187 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 PAX3P23760 479 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 ELF1P32519 619 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 PSMD6Q15008 389 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 SCARA3Q6AZY7 606 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 RNF135Q8IUD6 432 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 SMARCE1Q969G3 411 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 PRKD2Q9BZL6 878 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 CYP4F11Q9HBI6 524 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 RMND1Q9NWS8 449 aa12.75□□□□□ -0.37
RAB5C-204ENST00000547517 MUTYHQ9UIF7 546 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms