RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 FGFR1P11362 822 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 PAX3P23760 479 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 PRKCIP41743 596 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 PTK2Q05397 1052 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 RNASELQ05823 741 aaKnown RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
PACS1-202ENST00000524784 TUSC3Q13454 348 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 SPA17Q15506 151 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 IRF2BP2Q7Z5L9 587 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 FAM71AQ8IYT1 594 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 ARID3AQ99856 593 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.34□□□□□ -0.59
PACS1-202ENST00000524784 GPR88Q9GZN0 384 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 DNAI2Q9GZS0 605 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 FAM124BQ9H5Z6 455 aaPredicted RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 HAUS4Q9H6D7 363 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 SNX9Q9Y5X1 595 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 EPN1Q9Y6I3 576 aaPredicted RBP11.34□□□□□ -0.59
PACS1-202ENST00000524784 CITO14578 2027 aa11.34□□□□□ -0.59
PACS1-202ENST00000524784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 KPNA7A9QM74 516 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 PODXLO00592 558 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 WEE2P0C1S8 567 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 PNMA6AP0CW24 399 aaPredicted RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 CD58P19256 250 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 ITGB8P26012 769 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 ANXA13P27216 316 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 ASPAP45381 313 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 KCNJ6P48051 423 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 KRT83P78385 493 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 TCTN1Q2MV58 587 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 TMEM270Q6UE05 265 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 TMEM130Q8N3G9 435 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 MRPL9Q9BYD2 267 aaKnown RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 BCO2Q9BYV7 579 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 GOLGA2P5Q9HBQ8 144 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 IL23AQ9NPF7 189 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.6
PACS1-202ENST00000524784 ANK1P16157 1881 aa11.33□□□□□ -0.6
PACS1-202ENST00000524784 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 CCDC85CA6NKD9 419 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 TBKBP1A7MCY6 615 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 PPEF2O14830 753 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 HUS1O60921 280 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 B3GAT3O94766 335 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 UPP2O95045 317 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 NDUFA10O95299 355 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 FGBP02675 491 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 PLEKP08567 350 aaPredicted RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 CCDC175P0C221 793 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 ACRP10323 421 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 CYP11B1P15538 503 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 ACO1P21399 889 aaKnown RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 PDE6CP51160 858 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 CLCNKBP51801 687 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 KIF11P52732 1056 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 LILRA4P59901 499 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 FPGSQ05932 587 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 MTF1Q14872 753 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 NAB2Q15742 525 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 DSTYKQ6XUX3 929 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.32□□□□□ -0.61e-7■■■■□ 24.4
PACS1-202ENST00000524784 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 RBBP8NLQ8NC74 664 aaPredicted RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 KIAA1524Q8TCG1 905 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 DPF3Q92784 378 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 PDCL3Q9H2J4 239 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 SEPT11Q9NVA2 429 aaKnown RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 TBC1D13Q9NVG8 400 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 GDAP2Q9NXN4 497 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
PACS1-202ENST00000524784 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 RALGAPA2Q2PPJ7 1873 aa11.32□□□□□ -0.6
PACS1-202ENST00000524784 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
PACS1-202ENST00000524784 CYB561D2O14569 222 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms