RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 GPANK1O95872 356 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 ANXA1P04083 346 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 HLA-DOAP06340 250 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 GJB1P08034 283 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 MYBP10242 640 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPNE3-207ENST00000523588 HTR1BP28222 390 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 ABHD18Q0P651 414 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 OVCH2Q7RTZ1 564 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 FMNL3Q8IVF7 1028 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 LARP4BQ92615 738 aaKnown RBP6.95□□□□□ -1.3
CPNE3-207ENST00000523588 SCAMP4Q969E2 229 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 SLC35A4Q96G79 324 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 BOD1Q96IK1 185 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 VKORC1Q9BQB6 163 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 TMEM74BQ9NUR3 256 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 KCNE5Q9UJ90 142 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 PCDHA1Q9Y5I3 950 aa6.95□□□□□ -1.3
CPNE3-207ENST00000523588 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
CPNE3-207ENST00000523588 TUSC2O75896 110 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 PARNO95453 639 aaKnown RBP6.94□□□□□ -1.3
CPNE3-207ENST00000523588 ABHD16AO95870 558 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 AHSGP02765 367 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 MCM7P33993 719 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 PHKA1P46020 1223 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 CXADRP78310 365 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 CCDC157Q569K6 752 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 Q6ZPA2 131 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 PDPRQ8NCN5 879 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 SLC17A8Q8NDX2 589 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 PROKR1Q8TCW9 393 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
CPNE3-207ENST00000523588 MED15Q96RN5 788 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 IMPG2Q9BZV3 1241 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 SCAND2PQ9GZW5 306 aaPredicted RBP6.94□□□□□ -1.3
CPNE3-207ENST00000523588 GPR35Q9HC97 309 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 SLAMF7Q9NQ25 335 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 CFAP97Q9P2B7 532 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 ZDHHC8Q9ULC8 765 aa6.94□□□□□ -1.3
CPNE3-207ENST00000523588 UNC119BA6NIH7 251 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 CDKL5O76039 1030 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 SPDEFO95238 335 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 FSHBP01225 129 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 GNAI3P08754 354 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 AGFG1P52594 562 aaKnown RBP6.93□□□□□ -1.3
CPNE3-207ENST00000523588 PSMC1P62191 440 aaKnown RBP6.93□□□□□ -1.3
CPNE3-207ENST00000523588 RAB1AP62820 205 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 GNAI1P63096 354 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 SCAPQ12770 1279 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 TP53BP2Q13625 1128 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 CYP2A13Q16696 494 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 LY6G5CQ5SRR4 150 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ARMC6Q6NXE6 501 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 FOXR2Q6PJQ5 311 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ZNF627Q7L945 461 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 C14orf80Q86SX3 495 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 TTC8Q8TAM2 541 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
CPNE3-207ENST00000523588 LRIG1Q96JA1 1093 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ALOXE3Q9BYJ1 711 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ARMT1Q9H993 441 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 RNF181Q9P0P0 153 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
CPNE3-207ENST00000523588 ERC2O15083 957 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 ADH4P08319 380 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 RARBP10826 455 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 GUCY1B3Q02153 619 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 EMC10Q5UCC4 262 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 KCNV1Q6PIU1 500 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-207ENST00000523588 CELF5Q8N6W0 485 aaKnown RBP6.92□□□□□ -1.3
CPNE3-207ENST00000523588 SLC16A11Q8NCK7 471 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 RNF31Q96EP0 1072 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 C1orf112Q9NSG2 853 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 DDX20Q9UHI6 824 aaKnown RBP6.92□□□□□ -1.3
CPNE3-207ENST00000523588 AGAP1Q9UPQ3 857 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 MTO1Q9Y2Z2 717 aaKnown RBP6.92□□□□□ -1.3
CPNE3-207ENST00000523588 NOX1Q9Y5S8 564 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 COL4A3Q01955 1670 aa6.92□□□□□ -1.3
CPNE3-207ENST00000523588 A6NNZ2 444 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 KRT4P19013 534 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 HDCP19113 662 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 ZEB1P37275 1124 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-207ENST00000523588 GDF5P43026 501 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 POU6F2P78424 691 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-207ENST00000523588 EXOSC9Q06265 439 aaKnown RBP6.91□□□□□ -1.3
CPNE3-207ENST00000523588 KLF10Q13118 480 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 HABP2Q14520 560 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-207ENST00000523588 SPDYE7PQ495Y7 208 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 ANO6Q4KMQ2 910 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 ARHGAP29Q52LW3 1261 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 CRB2Q5IJ48 1285 aa6.91□□□□□ -1.3
CPNE3-207ENST00000523588 NPNTQ6UXI9 565 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms