RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PHOX2BQ99453 314 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 ASB7Q9H672 318 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 AVENQ9NQS1 362 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 WNT16Q9UBV4 365 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 KCNH3Q9ULD8 1083 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 INSL5Q9Y5Q6 135 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 NUMBLQ9Y6R0 609 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 MIA3Q5JRA6 1907 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 NRG2O14511 850 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-223ENST00000523125 PI15O43692 258 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 GCNT3O95395 438 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 RHOP08100 348 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 CFHP08603 1231 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 IDEP14735 1019 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 PTPN2P17706 415 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 ELF1P32519 619 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 PTPN5P54829 565 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 WNT7BP56706 349 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 POU5F1Q01860 360 aaKnown RBP13.42□□□□□ -0.26
VEGFA-223ENST00000523125 YWHAHQ04917 246 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-223ENST00000523125 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 SIX5Q8N196 739 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 POMGNT1Q8WZA1 660 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 ACCSQ96QU6 501 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 MFSD1Q9H3U5 465 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 KBTBD4Q9NVX7 518 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
VEGFA-223ENST00000523125 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 COL4A3Q01955 1670 aa13.42□□□□□ -0.26
VEGFA-223ENST00000523125 CUTAO60888 179 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 F13A1P00488 732 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 LRG1P02750 347 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 TYMPP19971 482 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 NUBP1P53384 320 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 POSTNQ15063 836 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-223ENST00000523125 PRSS36Q5K4E3 855 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-223ENST00000523125 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
VEGFA-223ENST00000523125 EFCAB13Q8IY85 973 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 GLIS3Q8NEA6 775 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 ING5Q8WYH8 240 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 CRISPLD1Q9H336 500 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 SLC2A4RGQ9NR83 387 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 DPP3Q9NY33 737 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 CEP72Q9P209 647 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 FBXL21Q9UKT6 434 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 MAFFQ9ULX9 164 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 MRPS23Q9Y3D9 190 aaKnown RBP13.41□□□□□ -0.26
VEGFA-223ENST00000523125 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
VEGFA-223ENST00000523125 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 GALR2O43603 387 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-223ENST00000523125 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CYP11A1P05108 521 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 PDIA4P13667 645 aaKnown RBP13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CPB1P15086 417 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CEBPBP17676 345 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 AOC1P19801 751 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 PAX3P23760 479 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 HOXD13P35453 343 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CCR2P41597 374 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 GPC5P78333 572 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 GPR17Q13304 367 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 ALCAMQ13740 583 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CNNM4Q6P4Q7 775 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 HS6ST3Q8IZP7 471 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 FLCNQ8NFG4 579 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 HPS3Q969F9 1004 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 DHX58Q96C10 678 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 MCRS1Q96EZ8 462 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CORO1BQ9BR76 489 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 FAM213AQ9BRX8 229 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-223ENST00000523125 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 EXOC7Q9UPT5 735 aa13.4□□□□□ -0.26
VEGFA-223ENST00000523125 MYO15AQ9UKN7 3530 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 COL4A2P08572 1712 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 OR6C75A6NL08 312 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 IL18RAPO95256 599 aa13.39□□□□□ -0.27
VEGFA-223ENST00000523125 HSP90AA1P07900 732 aaKnown RBP13.39□□□□□ -0.27
VEGFA-223ENST00000523125 GARTP22102 1010 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms