RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 AHSGP02765 367 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 ITGB1P05556 798 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
SQLE-202ENST00000518604 SLC6A2P23975 617 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 ARFIP2P53365 341 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 NOMO3P69849 1222 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 TCF15Q12870 199 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 R3HDM1Q15032 1099 aaKnown RBP5.59□□□□□ -1.51
SQLE-202ENST00000518604 ZNF585AQ6P3V2 769 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 TMPRSS6Q8IU80 811 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 C8orf49Q96NF6 230 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 MED15Q96RN5 788 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 PNKPQ96T60 521 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 ZNF703Q9H7S9 590 aaPredicted RBP5.59□□□□□ -1.51
SQLE-202ENST00000518604 KIAA1586Q9HCI6 787 aa5.59□□□□□ -1.51
SQLE-202ENST00000518604 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.51
SQLE-202ENST00000518604 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 GRXCR1A8MXD5 290 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 LEFTY2O00292 366 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 APAF1O14727 1248 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 PQBP1O60828 265 aaKnown RBP5.58□□□□□ -1.52
SQLE-202ENST00000518604 NPR1P16066 1061 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 HDCP19113 662 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 SLC7A1P30825 629 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
SQLE-202ENST00000518604 KCNJ5P48544 419 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 EXOSC9Q06265 439 aaKnown RBP5.58□□□□□ -1.52
SQLE-202ENST00000518604 PIGFQ07326 219 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 EFEMP1Q12805 493 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 UBE4AQ14139 1066 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 RABL3Q5HYI8 236 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 TSHZ3Q63HK5 1081 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 OR6B3Q8NGW1 331 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 PGBD4Q96DM1 585 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 TRIM54Q9BYV2 358 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 DPH1Q9BZG8 443 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 RNPEPQ9H4A4 650 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 SLAMF7Q9NQ25 335 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.58□□□□□ -1.52
SQLE-202ENST00000518604 FAM50BQ9Y247 325 aa5.58□□□□□ -1.52
SQLE-202ENST00000518604 PMM2O15305 246 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 MAP4K4O95819 1239 aaPredicted RBP5.57□□□□□ -1.52
SQLE-202ENST00000518604 KITP10721 976 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
SQLE-202ENST00000518604 CNGA2Q16280 664 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 SPATS1Q496A3 300 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 AMOTQ4VCS5 1084 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 NOMO2Q5JPE7 1267 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 ARMC6Q6NXE6 501 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 ZNF783Q6ZMS7 281 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 GDF7Q7Z4P5 450 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 USP37Q86T82 979 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 SLC17A8Q8NDX2 589 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 PHKBQ93100 1093 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 KLHL32Q96NJ5 620 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 SLC46A2Q9BY10 475 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 KLHL11Q9NVR0 708 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 PARPBPQ9NWS1 579 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 SLC45A2Q9UMX9 530 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 TSC22D4Q9Y3Q8 395 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 NEU2Q9Y3R4 380 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 CHST2Q9Y4C5 530 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 PLEKHM1Q9Y4G2 1056 aa5.57□□□□□ -1.52
SQLE-202ENST00000518604 A0A1B0GTW7 788 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 ZNF785A8K8V0 405 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 TBC1D4O60343 1298 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 PRSS23O95084 383 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 PEX11BO96011 259 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 SLC5A1P13866 664 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 RNASE9P60153 205 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 PSMC1P62191 440 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 FMO1Q01740 532 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 SLFN5Q08AF3 891 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 IFIT5Q13325 482 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 TOB2Q14106 344 aaPredicted RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 SLC44A4Q53GD3 710 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 FOXR2Q6PJQ5 311 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 SAMD3Q8N6K7 520 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 OR56A1Q8NGH5 318 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 NMD3Q96D46 503 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 MSLNLQ96KJ4 702 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 STRBPQ96SI9 672 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 CNPPD1Q9BV87 410 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 IMPG2Q9BZV3 1241 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 ZNF287Q9HBT7 754 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 OGDHLQ9ULD0 1010 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 SORCS3Q9UPU3 1222 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 USP15Q9Y4E8 981 aaPredicted RBP5.56□□□□□ -1.52
SQLE-202ENST00000518604 PCDHGB6Q9Y5F9 930 aa5.56□□□□□ -1.52
SQLE-202ENST00000518604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
SQLE-202ENST00000518604 USP19O94966 1318 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 BTN3A1O00481 513 aa5.55□□□□□ -1.52
SQLE-202ENST00000518604 RNASET2O00584 256 aaKnown RBP5.55□□□□□ -1.52
SQLE-202ENST00000518604 TBX3O15119 743 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms