RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 KLC2Q9H0B6 622 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 GPR35Q9HC97 309 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 MRPS18AQ9NVS2 196 aaKnown RBP6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 RLIMQ9NVW2 624 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 TCAF1Q9Y4C2 921 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 CHST2Q9Y4C5 530 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.43□□□□□ -1.385e-11■■■■□ 20.9
HMGCS1-207ENST00000514610 PLIN1O60240 522 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 DNAJB5O75953 348 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 MYL3P08590 195 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 NBPF7P0C2Y1 421 aaPredicted RBP6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 ACRV1P26436 265 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 RHOT2Q8IXI1 618 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 KRT78Q8N1N4 520 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 MARS2Q96GW9 593 aaKnown RBP6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 CNNM1Q9NRU3 951 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 KLHL11Q9NVR0 708 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 PIH1D1Q9NWS0 290 aaKnown RBP6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 SMPD4Q9NXE4 827 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 STK32BQ9NY57 414 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 MED16Q9Y2X0 877 aa6.42□□□□□ -1.38
HMGCS1-207ENST00000514610 AHRRA9YTQ3 701 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PLSCR1O15162 318 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 MGEA5O60502 916 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 ANXA1P04083 346 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 CKBP12277 381 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 EN2P19622 333 aaPredicted RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 ZNF135P52742 658 aaPredicted RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 CRHR2Q13324 411 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 CNGB1Q14028 1251 aaPredicted RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PRKD1Q15139 912 aaPredicted RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PDCD4Q53EL6 469 aaKnown RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 TSHZ3Q63HK5 1081 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PALM2Q8IXS6 379 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PCSK9Q8NBP7 692 aaKnown RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PDPRQ8NCN5 879 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 SLC17A8Q8NDX2 589 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 CHST13Q8NET6 341 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 OR56A1Q8NGH5 318 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PARD3BQ8TEW8 1205 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 NUP133Q8WUM0 1156 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 KBTBD7Q8WVZ9 684 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 MAML1Q92585 1016 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 SCAMP4Q969E2 229 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 ZSWIM1Q9BR11 485 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 DPH1Q9BZG8 443 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 IMPG2Q9BZV3 1241 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 HSFX1Q9UBD0 423 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 CPNE7Q9UBL6 633 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 EIF2B4Q9UI10 523 aaKnown RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 SORCS3Q9UPU3 1222 aa6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 USP15Q9Y4E8 981 aaPredicted RBP6.41□□□□□ -1.38
HMGCS1-207ENST00000514610 PIK3CBP42338 1070 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 KCNJ5P48544 419 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 SUMO3P55854 103 aaPredicted RBP6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 RHBDL3P58872 404 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 FMO1Q01740 532 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 TOB2Q14106 344 aaPredicted RBP6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 LRRC55Q6ZSA7 311 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 SESTD1Q86VW0 696 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 FBXO41Q8TF61 875 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 LRRC27Q9C0I9 530 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 TINAGL1Q9GZM7 467 aaPredicted RBP6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 ZNF768Q9H5H4 540 aaKnown RBP6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 SMURF2Q9HAU4 748 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 PHTF1Q9UMS5 762 aa6.4□□□□□ -1.38
HMGCS1-207ENST00000514610 AATKQ6ZMQ8 1374 aa6.4□□□□□ -1.39
HMGCS1-207ENST00000514610 MUSKO15146 869 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 TRIM24O15164 1050 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 UNC5CO95185 931 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 ABHD16AO95870 558 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 ELANEP08246 267 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 FAM189BP81408 668 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 PICALMQ13492 652 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 HABP2Q14520 560 aaPredicted RBP6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 CNGA2Q16280 664 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 USP37Q86T82 979 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 TMPRSS6Q8IU80 811 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 AOPEPQ8N6M6 819 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 IL17DQ8TAD2 202 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 LRIG1Q96JA1 1093 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 TBCBQ99426 244 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 BTBD1Q9H0C5 482 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF700Q9H0M5 742 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 NUP62CLQ9H1M0 184 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 CORO2BQ9UQ03 480 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 CDYLQ9Y232 598 aa6.39□□□□□ -1.39
HMGCS1-207ENST00000514610 ISM1B1AKI9 464 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 M0QYG6 137 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 FAM20BO75063 409 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 SCAF4O95104 1147 aaKnown RBP6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 KIF20AO95235 890 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 BRAFP15056 766 aa6.38□□□□□ -1.39
HMGCS1-207ENST00000514610 ZNF20P17024 532 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms