RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 AFF4Q9UHB7 1163 aaKnown RBP19.46■□□□□ 0.71
TPM3-220ENST00000509601 KCNH3Q9ULD8 1083 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 NUMBLQ9Y6R0 609 aa19.46■□□□□ 0.71
TPM3-220ENST00000509601 CUTAO60888 179 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 VNN2O95498 520 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 F13A1P00488 732 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 PTPN2P17706 415 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 YWHAHQ04917 246 aaPredicted RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 FOXD4L6Q3SYB3 417 aaPredicted RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 PABPC1LQ4VXU2 614 aaKnown RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 ASTLQ6HA08 431 aaPredicted RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 FOXD4L3Q6VB84 417 aaPredicted RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 DSTYKQ6XUX3 929 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 RNF19BQ6ZMZ0 732 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 SENP8Q96LD8 212 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 AVENQ9NQS1 362 aaPredicted RBP19.45■□□□□ 0.7
TPM3-220ENST00000509601 C2CD2Q9Y426 696 aa19.45■□□□□ 0.7
TPM3-220ENST00000509601 ANK1P16157 1881 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 KRBA1A5PL33 1030 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 PRRG1O14668 218 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 PI15O43692 258 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 PRPF6O94906 941 aaKnown RBP19.44■□□□□ 0.7
TPM3-220ENST00000509601 GCNT3O95395 438 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 LRG1P02750 347 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 RHOP08100 348 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 CFHP08603 1231 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 TYMPP19971 482 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 CLCN5P51795 746 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 WNT7BP56706 349 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 ADCY1Q08828 1119 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 TMEM132DQ14C87 1099 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 SLC5A9Q2M3M2 681 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 CWF19L1Q69YN2 538 aaKnown RBP19.44■□□□□ 0.7
TPM3-220ENST00000509601 SPRYD3Q8NCJ5 442 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 BORCS6Q96GS4 357 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 TNMDQ9H2S6 317 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 MAFFQ9ULX9 164 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 EXOC7Q9UPT5 735 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 INSL5Q9Y5Q6 135 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 SCN1AP35498 2009 aa19.44■□□□□ 0.7
TPM3-220ENST00000509601 OR4Q2P0C623 313 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 SRFP11831 508 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 NUBP1P53384 320 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 PTPN5P54829 565 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 PRSS36Q5K4E3 855 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 NPAS3Q8IXF0 933 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 EFCAB13Q8IY85 973 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 SIX5Q8N196 739 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 GLIS3Q8NEA6 775 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 HPS3Q969F9 1004 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 PHOX2BQ99453 314 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 OXCT2Q9BYC2 517 aaPredicted RBP19.43■□□□□ 0.7
TPM3-220ENST00000509601 TRIM9Q9C026 710 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 CRISPLD1Q9H336 500 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 DPP3Q9NY33 737 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 CEP72Q9P209 647 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 FBXL21Q9UKT6 434 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 PCDHA7Q9UN72 937 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 MRPS23Q9Y3D9 190 aaKnown RBP19.43■□□□□ 0.7
TPM3-220ENST00000509601 DMDP11532 3685 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 MYH15Q9Y2K3 1946 aa19.43■□□□□ 0.7
TPM3-220ENST00000509601 NRG2O14511 850 aaPredicted RBP19.42■□□□□ 0.7
TPM3-220ENST00000509601 GARTP22102 1010 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 PAX3P23760 479 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 HOXD13P35453 343 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 GPR17Q13304 367 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 ALCAMQ13740 583 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 SCARA3Q6AZY7 606 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 ALYREFQ86V81 257 aaKnown RBP19.42■□□□□ 0.7
TPM3-220ENST00000509601 CCDC65Q8IXS2 484 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 FLCNQ8NFG4 579 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 GPR152Q8TDT2 470 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 ING5Q8WYH8 240 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 DHX58Q96C10 678 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 SAAL1Q96ER3 474 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 MCRS1Q96EZ8 462 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 CBWD1Q9BRT8 395 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 MFSD1Q9H3U5 465 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 CUEDC2Q9H467 287 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 SLC2A4RGQ9NR83 387 aa19.42■□□□□ 0.7
TPM3-220ENST00000509601 OR6C75A6NL08 312 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 CYP11A1P05108 521 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 HSP90AA1P07900 732 aaKnown RBP19.41■□□□□ 0.7
TPM3-220ENST00000509601 CPB1P15086 417 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 CCR2P41597 374 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 GPC5P78333 572 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 OVOS1Q6IE37 1185 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 CNNM4Q6P4Q7 775 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 USP37Q86T82 979 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 NT5DC4Q86YG4 428 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 HS6ST3Q8IZP7 471 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 IQUBQ8NA54 791 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 TCEAL4Q96EI5 215 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 TMEM209Q96SK2 561 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 CORO1BQ9BR76 489 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 LRRC27Q9C0I9 530 aa19.41■□□□□ 0.7
TPM3-220ENST00000509601 TMEM206Q9H813 350 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms