RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MAGOHBQ96A72 148 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 FNBP1Q96RU3 617 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC113Q9H0I3 377 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 THAP2Q9H0W7 228 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 CTTNBP2NLQ9P2B4 639 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 ATP8A1Q9Y2Q0 1164 aa11.76□□□□□ -0.53
SH3RF1-203ENST00000508685 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CYP26A1O43174 497 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 AGTP01019 485 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 LGALS2P05162 132 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 SCP2P22307 547 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CTNNA2P26232 953 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 GTF2H1P32780 548 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 FLT3P36888 993 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 TNFSF9P41273 254 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 SLC26A2P50443 739 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CLDN10P78369 228 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 GRB14Q14449 540 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 PSMD6Q15008 389 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM110CQ1W6H9 321 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 LACTB2Q53H82 288 aaPredicted RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 TDRD10Q5VZ19 366 aaKnown RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 C15orf39Q6ZRI6 1047 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 NOP9Q86U38 636 aaKnown RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM71AQ8IYT1 594 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 EPS8L1Q8TE68 723 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 SHC3Q92529 594 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 RAPGEF5Q92565 580 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 MAML3Q96JK9 1138 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 NT5C1BQ96P26 610 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 KIAA1586Q9HCI6 787 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 VTA1Q9NP79 307 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 ERAP1Q9NZ08 941 aa11.75□□□□□ -0.53
SH3RF1-203ENST00000508685 CLDN3O15551 220 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM189A1O60320 539 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CALCAP01258 141 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 FTLP02792 175 aaPredicted RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MNAT1P51948 309 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 EFNA5P52803 228 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MFAP3P55082 362 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CYP1B1Q16678 543 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ZACNQ401N2 412 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 SLFN12LQ6IEE8 588 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 EFCAB12Q6NXP0 572 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CCDC91Q7Z6B0 441 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ANKS4BQ8N8V4 417 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 TCP11Q8WWU5 503 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CHMP6Q96FZ7 201 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 PPP1R16BQ96T49 567 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ZSWIM1Q9BR11 485 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ROPN1BQ9BZX4 212 aaPredicted RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ROPN1Q9HAT0 212 aaPredicted RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CPA4Q9UI42 421 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 NOCTQ9UK39 431 aaKnown RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ASAP2O43150 1006 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 B4GALT5O43286 388 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 ADCY6O43306 1168 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 GAS2O43903 313 aaKnown RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 HBP1O60381 514 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 TOM1L1O75674 476 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 C22orf31O95567 290 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 GH1P01241 217 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 PRKCBP05771 671 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 INSRRP14616 1297 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MAP2K2P36507 400 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 PTGIRP43119 386 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MAPK6Q16659 721 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 FBXW10Q5XX13 1052 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 CDR2LQ86X02 465 aaPredicted RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 OR5B17Q8NGF7 314 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 IPO4Q8TEX9 1081 aaKnown RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MAIP1Q8WWC4 291 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 FAM81BQ96LP2 452 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 XPO6Q96QU8 1125 aaKnown RBP11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 TCHPQ9BT92 498 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 MINDY3Q9H8M7 445 aa11.74□□□□□ -0.53
SH3RF1-203ENST00000508685 UVRAGQ9P2Y5 699 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms