RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CUEDC2Q9H467 287 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 MRPL44Q9H9J2 332 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 AVENQ9NQS1 362 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 TBC1D7Q9P0N9 293 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 DNMT3BQ9UBC3 853 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 AFF4Q9UHB7 1163 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 AGO2Q9UKV8 859 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 CDH7Q9ULB5 785 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 MAFFQ9ULX9 164 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 C2CD2Q9Y426 696 aa9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 ZFP37Q9Y6Q3 630 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-209ENST00000506632 TSC2P49815 1807 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 SCN1AP35498 2009 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 PIRO00625 290 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 SPTLC1O15269 473 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 NARSO43776 548 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 GCNT3O95395 438 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 SEC24AO95486 1093 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 VNN2O95498 520 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 IDEP14735 1019 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 GARTP22102 1010 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 PAX3P23760 479 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 LILRA4P59901 499 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 PDAP1Q13442 181 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 TMEM132DQ14C87 1099 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 C9orf57Q5W0N0 161 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 EFCAB13Q8IY85 973 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 SLC44A3Q8N4M1 653 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 ITFG1Q8TB96 612 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 KCNG4Q8TDN1 519 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 POMGNT1Q8WZA1 660 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 FGF13Q92913 245 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 OXCT2Q9BYC2 517 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 TRIM9Q9C026 710 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 PANK4Q9NVE7 773 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 HCFC1R1Q9NWW0 138 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 EXOC7Q9UPT5 735 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 PCDHB13Q9Y5F0 798 aa9.84□□□□□ -0.83
PDLIM5-209ENST00000506632 IL18RAPO95256 599 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 CYP11A1P05108 521 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 RHOP08100 348 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 SRFP11831 508 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 NPR3P17342 541 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 WNT7BP56706 349 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 NHLH1Q02575 133 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 EHHADHQ08426 723 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 TCF15Q12870 199 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 SLC5A9Q2M3M2 681 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 PABPC1LQ4VXU2 614 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 CWF19L1Q69YN2 538 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 POTEHQ6S545 545 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 BRSK2Q8IWQ3 736 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 NPAS3Q8IXF0 933 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 CCDC65Q8IXS2 484 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 GLIS3Q8NEA6 775 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 ZSWIM2Q8NEG5 633 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 FGF14Q92915 247 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 SENP8Q96LD8 212 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 PRRX2Q99811 253 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 LRRC27Q9C0I9 530 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 MAGEF1Q9HAY2 307 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 CYP4F11Q9HBI6 524 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 WNT16Q9UBV4 365 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 RCOR1Q9UKL0 485 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 PCDHA7Q9UN72 937 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 TIMM13Q9Y5L4 95 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 NUMBLQ9Y6R0 609 aa9.83□□□□□ -0.84
PDLIM5-209ENST00000506632 OR6C75A6NL08 312 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 PRRG1O14668 218 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 PRPF6O94906 941 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 LDHAP00338 332 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 LRG1P02750 347 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ODC1P11926 461 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 CPB1P15086 417 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 PTPN2P17706 415 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ELF1P32519 619 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 HOXD13P35453 343 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 CLCN5P51795 746 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 EPHA5P54756 1037 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ARPP19P56211 112 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 AMPD3Q01432 767 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 DNM1Q05193 864 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ADCY1Q08828 1119 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 GPR17Q13304 367 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 MYBPC2Q14324 1141 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 PRSS36Q5K4E3 855 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 RESP18Q5W5W9 173 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 OVOS1Q6IE37 1185 aa9.82□□□□□ -0.84
PDLIM5-209ENST00000506632 PARM1Q6UWI2 310 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms