RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZFPM1Q8IX07 1006 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 GRAMD1CQ8IYS0 662 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 PROKR1Q8TCW9 393 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 BRIX1Q8TDN6 353 aaKnown RBP5.52□□□□□ -1.53
ITGB1-214ENST00000488427 HPS3Q969F9 1004 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 CLIP3Q96DZ5 547 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 BRD9Q9H8M2 597 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 LMBRD1Q9NUN5 540 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 KLHL11Q9NVR0 708 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 ZDHHC8Q9ULC8 765 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 EID1Q9Y6B2 187 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 CFAP43Q8NDM7 1665 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 MAP3K4Q9Y6R4 1608 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 AHRRA9YTQ3 701 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 PLSCR1O15162 318 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 CDKL5O76039 1030 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 SLPIP03973 132 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 CFIP05156 583 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 PDCD4Q53EL6 469 aaKnown RBP5.51□□□□□ -1.53
ITGB1-214ENST00000488427 NXNQ6DKJ4 435 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 HEATR3Q7Z4Q2 680 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 CATIPQ7Z7H3 387 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 SYT12Q8IV01 421 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 DENND1CQ8IV53 801 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 AMER2Q8N7J2 671 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 BOD1Q96IK1 185 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 MYOCQ99972 504 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 VRK1Q99986 396 aaPredicted RBP5.51□□□□□ -1.53
ITGB1-214ENST00000488427 GTPBP4Q9BZE4 634 aaKnown RBP5.51□□□□□ -1.53
ITGB1-214ENST00000488427 GALNT9Q9HCQ5 603 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 SARS2Q9NP81 518 aaKnown RBP5.51□□□□□ -1.53
ITGB1-214ENST00000488427 FBXO34Q9NWN3 711 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 STXBP5LQ9Y2K9 1186 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 STRCQ7RTU9 1775 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 LTBP4Q8N2S1 1624 aa5.51□□□□□ -1.53
ITGB1-214ENST00000488427 H3BML4 177 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 AP1G1O43747 822 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 NCR1O76036 304 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 RHOBTB3O94955 611 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 NDUFA10O95299 355 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 ACVRL1P37023 503 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 USP14P54578 494 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 ZNF280AP59817 542 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-214ENST00000488427 SLC25A3Q00325 362 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 DSC2Q02487 901 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-214ENST00000488427 BEAN1Q3B7T3 259 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 FLYWCH1Q4VC44 716 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 Q8N1X5 172 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 CPEB3Q8NE35 698 aaKnown RBP5.5□□□□□ -1.53
ITGB1-214ENST00000488427 SCAMP4Q969E2 229 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 RAB24Q969Q5 203 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 CCDC136Q96JN2 1154 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 SLITRK6Q9H5Y7 841 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 MMRN2Q9H8L6 949 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 FAM204AQ9H8W3 233 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 CYP4F11Q9HBI6 524 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 SLC2A4RGQ9NR83 387 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 TBCCD1Q9NVR7 557 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 ABCF2Q9UG63 623 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 DMTF1Q9Y222 760 aa5.5□□□□□ -1.53
ITGB1-214ENST00000488427 SETD1AO15047 1707 aaKnown RBP5.49□□□□□ -1.53
ITGB1-214ENST00000488427 MYADML2A6NDP7 307 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 TMEM200CA6NKL6 621 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 NARSO43776 548 aaKnown RBP5.49□□□□□ -1.53
ITGB1-214ENST00000488427 SOAT2O75908 522 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 AGFG2O95081 481 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 DGCR2P98153 550 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 SATB1Q01826 763 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 SNAPC2Q13487 334 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 UTP14CQ5TAP6 766 aaKnown RBP5.49□□□□□ -1.53
ITGB1-214ENST00000488427 ABHD17BQ5VST6 288 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 CLNKQ7Z7G1 428 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 DAAM2Q86T65 1068 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 ARHGEF19Q8IW93 802 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 TCEAL8Q8IYN2 117 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 TMEM132CQ8N3T6 1108 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 LCORLQ8N3X6 602 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 RNF31Q96EP0 1072 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 RTFDC1Q9BY42 306 aaPredicted RBP5.49□□□□□ -1.53
ITGB1-214ENST00000488427 C1orf112Q9NSG2 853 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 PNPOQ9NVS9 261 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 PAXBP1Q9Y5B6 917 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 PCDHA3Q9Y5H8 950 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
ITGB1-214ENST00000488427 SOGA1O94964 1423 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 GRIN2AQ12879 1464 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 H3BUI4 141 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 F2RL2O00254 374 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 ZNF185O15231 689 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 B3GALT2O43825 422 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 SCGB1D2O95969 90 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 GJB1P08034 283 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 RARBP10826 455 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 TYRP14679 529 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 FGFR4P22455 802 aa5.48□□□□□ -1.53
ITGB1-214ENST00000488427 MAP2K6P52564 334 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms