RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 H7C4K7 107 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 PIRO00625 290 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 C1RP00736 705 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 LILRA4P59901 499 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 ROR1Q01973 937 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 LMBRD2Q68DH5 695 aaPredicted RBP25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 RDH13Q8NBN7 331 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 CCDC34Q96HJ3 373 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 FBXL5Q9UKA1 691 aa25.6■■□□□ 1.69
RHBDD3-205ENST00000488106 LOC730098B7Z3J9 87 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SPTLC1O15269 473 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 C8AP07357 584 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SNRPFP62306 86 aaKnown RBP25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 YWHAHQ04917 246 aaPredicted RBP25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 FAM160A1Q05DH4 1040 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 PNOCQ13519 176 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SNRNP35Q16560 246 aaKnown RBP25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SLC8B1Q6J4K2 584 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 C15orf39Q6ZRI6 1047 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SMG7Q92540 1137 aaKnown RBP25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 SENP8Q96LD8 212 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 MTMR12Q9C0I1 747 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 ZDHHC7Q9NXF8 308 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 PTPRJQ12913 1337 aa25.59■■□□□ 1.69
RHBDD3-205ENST00000488106 ZMYND10O75800 440 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 RHOBTB3O94955 611 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 ITGB3P05106 788 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 TMEM191BP0C7N4 346 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 ODC1P11926 461 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 POLR2BP30876 1174 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 TAF6P49848 677 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 SNW1Q13573 536 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 MRPL58Q14197 206 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 USP37Q86T82 979 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 XXYLT1Q8NBI6 393 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 SLC7A14Q8TBB6 771 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 CACTINQ8WUQ7 758 aaKnown RBP25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 ZNF707Q96C28 371 aaPredicted RBP25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 PIDD1Q9HB75 910 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 KIAA1586Q9HCI6 787 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 CHMP5Q9NZZ3 219 aa25.58■■□□□ 1.69
RHBDD3-205ENST00000488106 WDR27A2RRH5 827 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 TBC1D4O60343 1298 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 PPM1LQ5SGD2 360 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 CCDC149Q6ZUS6 474 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 RNF135Q8IUD6 432 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 C1orf127Q8N9H9 656 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 ENGASEQ8NFI3 743 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 ZNF560Q96MR9 790 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 CGNQ9P2M7 1197 aaKnown RBP25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 NR2E1Q9Y466 385 aa25.57■■□□□ 1.68
RHBDD3-205ENST00000488106 KRT19P08727 400 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 CPB1P15086 417 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 C12orf56Q8IXR9 622 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 GOLGA5Q8TBA6 731 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 ANKRD36BP1Q96IX9 119 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 PRKD2Q9BZL6 878 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 AGAP1Q9UPQ3 857 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 MAPK8IP1Q9UQF2 711 aa25.56■■□□□ 1.68
RHBDD3-205ENST00000488106 C2CD4DB7Z1M9 353 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 CCL16O15467 120 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 EXOC3O60645 756 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 DLATP10515 647 aaKnown RBP25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 TYMPP19971 482 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 CYP24A1Q07973 514 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 SURF1Q15526 300 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 SV2CQ496J9 727 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 OVOS1Q6IE37 1185 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 TDRD5Q8NAT2 981 aaKnown RBP25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 OR5B17Q8NGF7 314 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 KCTD10Q9H3F6 313 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 EPHX3Q9H6B9 360 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 INTS13Q9NVM9 706 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 MUTYHQ9UIF7 546 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 ITGA11Q9UKX5 1188 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 CLUHO75153 1309 aa25.55■■□□□ 1.68
RHBDD3-205ENST00000488106 GADD45BO75293 160 aaPredicted RBP25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 OAZ2O95190 189 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 TNNC2P02585 160 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 PAX3P23760 479 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 BFSP1Q12934 665 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 KCNB1Q14721 858 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 SCARA3Q6AZY7 606 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 CSGALNACT2Q8N6G5 542 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 ZNF461Q8TAF7 563 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 CCDC127Q96BQ5 260 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 POLIQ9UNA4 740 aa25.54■■□□□ 1.68
RHBDD3-205ENST00000488106 PTPRDP23468 1912 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 ARHGEF37A1IGU5 675 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 KPNA7A9QM74 516 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 CYB561D2O14569 222 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 PRRG1O14668 218 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 HNRNPA1P09651 372 aaKnown RBP eCLIP25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 OR4Q2P0C623 313 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 PNPLA4P41247 253 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 CYP26C1Q6V0L0 522 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 WDR49Q8IV35 697 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 ERCC4Q92889 916 aaPredicted RBP25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 FNBP1Q96RU3 617 aa25.53■■□□□ 1.68
RHBDD3-205ENST00000488106 SIX4Q9UIU6 781 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms