RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 MRPL44Q9H9J2 332 aaKnown RBP17.17■□□□□ 0.34
GARNL3-215ENST00000478702 MAGEF1Q9HAY2 307 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 HCFC1R1Q9NWW0 138 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 A0A0B4J269 797 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 OGTO15294 1046 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 CLTAP09496 248 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 IDEP14735 1019 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 TNFSF9P41273 254 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 CLCNKBP51801 687 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 KRT85P78386 507 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 ELAVL2Q12926 359 aaKnown RBP17.16■□□□□ 0.34
GARNL3-215ENST00000478702 ALCAMQ13740 583 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 UPP1Q16831 310 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 SLC10A6Q3KNW5 377 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 SLC44A4Q53GD3 710 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 ZBTB41Q5SVQ8 909 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 RSPO2Q6UXX9 243 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-215ENST00000478702 MTSS1LQ765P7 747 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 IQUBQ8NA54 791 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 SLC7A14Q8TBB6 771 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 LEO1Q8WVC0 666 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-215ENST00000478702 SHDQ96IW2 340 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 FAM13BQ9NYF5 915 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 DNMT3BQ9UBC3 853 aaKnown RBP17.16■□□□□ 0.34
GARNL3-215ENST00000478702 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 STYXL1Q9Y6J8 313 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 RALGAPA1Q6GYQ0 2036 aa17.16■□□□□ 0.34
GARNL3-215ENST00000478702 TTC26A0AVF1 554 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 TISP43B9A030 160 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 ANKRD63C9JTQ0 380 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CD72P21854 359 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CASP5P51878 434 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PRKCQQ04759 706 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 RAB33AQ14088 237 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PUM1Q14671 1186 aaKnown RBP eCLIP17.15■□□□□ 0.34
GARNL3-215ENST00000478702 ENOX2Q16206 610 aaKnown RBP17.15■□□□□ 0.34
GARNL3-215ENST00000478702 L1TD1Q5T7N2 865 aaKnown RBP17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CNNM4Q6P4Q7 775 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CD300LGQ6UXG3 332 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-215ENST00000478702 NPAS3Q8IXF0 933 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CCDC65Q8IXS2 484 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 CHAMP1Q96JM3 812 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 KXD1Q9BQD3 176 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 FGFBP2Q9BYJ0 223 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 TBC1D7Q9P0N9 293 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 F5P12259 2224 aa17.15■□□□□ 0.34
GARNL3-215ENST00000478702 PODXLO00592 558 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 POLR2DO15514 142 aaKnown RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 B3GAT3O94766 335 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 GCNT3O95395 438 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 POU2F2P09086 479 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 FGFR3P22607 806 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 OR1D2P34982 312 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 UBXN2BQ14CS0 331 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 ZNF528Q3MIS6 628 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 C18orf25Q96B23 403 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 DDX27Q96GQ7 796 aaKnown RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 SPATA32Q96LK8 384 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 IKZF4Q9H2S9 585 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 LTB4R2Q9NPC1 389 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 SPATA6Q9NWH7 488 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 TUBGCP4Q9UGJ1 667 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 CPSF3Q9UKF6 684 aaKnown RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 FBXO4Q9UKT5 387 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-215ENST00000478702 SPTBN2O15020 2390 aa17.14■□□□□ 0.33
GARNL3-215ENST00000478702 SCN1AP35498 2009 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 SHISA7A6NL88 538 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 FAM170BA6NMN3 283 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
GARNL3-215ENST00000478702 XYLBO75191 536 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 ADRB2P07550 413 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 ASIC1P78348 528 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 AMPD3Q01432 767 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 KCNA1Q09470 495 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 ING5Q8WYH8 240 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 ACCSQ96QU6 501 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 BCO2Q9BYV7 579 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 PLA2G2FQ9BZM2 168 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 MTRRQ9UBK8 725 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
GARNL3-215ENST00000478702 CACNA1BQ00975 2339 aa17.12■□□□□ 0.33
GARNL3-215ENST00000478702 LAMTOR5O43504 91 aa17.12■□□□□ 0.33
GARNL3-215ENST00000478702 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms