RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 PDPRQ8NCN5 879 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 SLC17A8Q8NDX2 589 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 NSUN7Q8NE18 718 aaKnown RBP5.02□□□□□ -1.61
CCNL1-220ENST00000478454 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 ZNF483Q8TF39 744 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-220ENST00000478454 LARP4BQ92615 738 aaKnown RBP5.02□□□□□ -1.61
CCNL1-220ENST00000478454 HAS1Q92839 578 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 IMPG2Q9BZV3 1241 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 RNPEPQ9H4A4 650 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 WDCPQ9H6R7 721 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 ANKFY1Q9P2R3 1169 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 PCDHA6Q9UN73 950 aa5.02□□□□□ -1.61
CCNL1-220ENST00000478454 A0A088AWK7 358 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 VSTM5A8MXK1 200 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 SPDEFO95238 335 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 GPANK1O95872 356 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 KRT4P19013 534 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 HDCP19113 662 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 BMPR1AP36894 532 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 ACVRL1P37023 503 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 RAB1AP62820 205 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CXADRP78310 365 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 EXOSC9Q06265 439 aaKnown RBP5.01□□□□□ -1.61
CCNL1-220ENST00000478454 SCAPQ12770 1279 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 TP53BP2Q13625 1128 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 KIF22Q14807 665 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CYP2A13Q16696 494 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CCDC157Q569K6 752 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 VRK3Q8IV63 474 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 PROKR1Q8TCW9 393 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CDK5RAP3Q96JB5 506 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 BRD9Q9H8M2 597 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CTTNBP2NLQ9P2B4 639 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CHPF2Q9P2E5 772 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 STAP2Q9UGK3 403 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 FEZ2Q9UHY8 353 aaPredicted RBP5.01□□□□□ -1.61
CCNL1-220ENST00000478454 ING1Q9UK53 422 aaPredicted RBP5.01□□□□□ -1.61
CCNL1-220ENST00000478454 CDYLQ9Y232 598 aa5.01□□□□□ -1.61
CCNL1-220ENST00000478454 ZNF785A8K8V0 405 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 FZD7O75084 574 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 FSHBP01225 129 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 SPATA31D3P0C874 917 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 DDX6P26196 483 aaKnown RBP eCLIP5□□□□□ -1.61
CCNL1-220ENST00000478454 PTGS2P35354 604 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 AGFG1P52594 562 aaKnown RBP5□□□□□ -1.61
CCNL1-220ENST00000478454 MC2RQ01718 297 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 GALEQ14376 348 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 GRM3Q14832 879 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 LLGL1Q15334 1064 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 TIGD2Q4W5G0 525 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 CRB2Q5IJ48 1285 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 NPNTQ6UXI9 565 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 SPATA31D4Q6ZUB0 917 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 PDSS2Q86YH6 399 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 WDR75Q8IWA0 830 aaKnown RBP5□□□□□ -1.61
CCNL1-220ENST00000478454 CFAP52Q8N1V2 620 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 PNKPQ96T60 521 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 B3GNT5Q9BYG0 378 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 REXO4Q9GZR2 422 aaKnown RBP5□□□□□ -1.61
CCNL1-220ENST00000478454 ATP6V0A4Q9HBG4 840 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 GPR35Q9HC97 309 aa5□□□□□ -1.61
CCNL1-220ENST00000478454 ZBTB32Q9Y2Y4 487 aaPredicted RBP5□□□□□ -1.61
CCNL1-220ENST00000478454 ABHD16AO95870 558 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 IL12RB1P42701 662 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ZNF135P52742 658 aaPredicted RBP4.99□□□□□ -1.61
CCNL1-220ENST00000478454 KLF10Q13118 480 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ARHGAP29Q52LW3 1261 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 CYB5RLQ6IPT4 315 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 GPR149Q86SP6 731 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ARHGEF19Q8IW93 802 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ASB10Q8WXI3 467 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 SCAMP4Q969E2 229 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 RNF31Q96EP0 1072 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 BOD1Q96IK1 185 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 FAM167AQ96KS9 214 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 MRGPRX1Q96LB2 322 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ALOXE3Q9BYJ1 711 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 WDR11Q9BZH6 1224 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 SERHL2Q9H4I8 314 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 ZMAT3Q9HA38 289 aaKnown RBP4.99□□□□□ -1.61
CCNL1-220ENST00000478454 RLIMQ9NVW2 624 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 KCNE5Q9UJ90 142 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 COL4A3Q01955 1670 aa4.99□□□□□ -1.61
CCNL1-220ENST00000478454 DNAJB5O75953 348 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 CDKL5O76039 1030 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 SUN1O94901 812 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 SLPIP03973 132 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 ANXA1P04083 346 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 GNAI3P08754 354 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
CCNL1-220ENST00000478454 RARBP10826 455 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 MAKP20794 623 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 TOB1P50616 345 aaPredicted RBP4.98□□□□□ -1.61
CCNL1-220ENST00000478454 USP14P54578 494 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 GNAI1P63096 354 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.616e-12■■■■□ 23.4
CCNL1-220ENST00000478454 BOP1Q14137 746 aaKnown RBP4.98□□□□□ -1.61
CCNL1-220ENST00000478454 HABP2Q14520 560 aaPredicted RBP4.98□□□□□ -1.61
CCNL1-220ENST00000478454 GEN1Q17RS7 908 aa4.98□□□□□ -1.61
CCNL1-220ENST00000478454 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms