RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 NXF1Q9UBU9 619 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 ANK1P16157 1881 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 MYO1FO00160 1098 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 YWHAEP62258 255 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF410Q86VK4 478 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 PHF13Q86YI8 300 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 NR2E1Q9Y466 385 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 A6NJR5 290 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 TSPAN1O60635 241 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 ASPAP45381 313 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 RWDD2BP57060 319 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 POU5F1Q01860 360 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 ASB7Q9H672 318 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 MED4Q9NPJ6 270 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 PYGMP11217 842 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 HSPA6P17066 643 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 NNTQ13423 1086 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 TRADDQ15628 312 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 MMS22LQ6ZRQ5 1243 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 C1orf127Q8N9H9 656 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 GINS2Q9Y248 185 aa16.37■□□□□ 0.21
RPUSD3-215ENST00000475470 MGAMO43451 1857 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 A0A1B0GUA9 196 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 ITGB3P05106 788 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 BRD2P25440 801 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 IRF5Q13568 498 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 CUL1Q13616 776 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 TERF2Q15554 542 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 KIZQ2M2Z5 673 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 SLC10A6Q3KNW5 377 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 TLK2Q86UE8 772 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 TTI1O43156 1089 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 SMIM10L2AP0DMW4 78 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 SMIM10L2BP0DMW5 78 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 CYP2C19P33261 490 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 SLC1A1P43005 524 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 OLFML2BQ68BL8 750 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF771Q7L3S4 317 aaPredicted RBP16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 DOCK3Q8IZD9 2030 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 ACAP3Q96P50 834 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 UTP11Q9Y3A2 253 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 SCINQ9Y6U3 715 aa16.36■□□□□ 0.21
RPUSD3-215ENST00000475470 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 MEFVO15553 781 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 LSM8O95777 96 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 F2P00734 622 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 CYP2B6P20813 491 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 FGFR4P22455 802 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM193AP78312 1265 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 MAMLD1Q13495 774 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 EIF1ADQ8N9N8 165 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 WHAMMQ8TF30 809 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 CELF4Q9BZC1 486 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 ERVK-5Q9HDB9 667 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 TRPM7Q96QT4 1865 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM153BP0C7A2 387 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 GUCY2FP51841 1108 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 CDC42EP1Q00587 391 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 CCL14Q16627 93 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 SMYD5Q6GMV2 418 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 PLEKHA7Q6IQ23 1121 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 TMEM35BQ8NCS4 154 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 PPP1R13LQ8WUF5 828 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 LENG1Q96BZ8 264 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 GCOM2Q9BZD3 368 aaPredicted RBP16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 PARVAQ9NVD7 372 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
RPUSD3-215ENST00000475470 MMP8P22894 467 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 RAP1GAPP47736 663 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 DR1Q01658 176 aa16.34■□□□□ 0.21
RPUSD3-215ENST00000475470 PTP4A2Q12974 167 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms