RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 OCRLQ01968 901 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 KLRC3Q07444 240 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 KPNB1Q14974 876 aaKnown RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 AAK1Q2M2I8 961 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 MUM1Q2TAK8 710 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PABPC1LQ4VXU2 614 aaKnown RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 TMEM31Q5JXX7 168 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 SH2D4BQ5SQS7 431 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 INTS8Q75QN2 995 aaKnown RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 CABP7Q86V35 215 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 BLIDQ8IZY5 108 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 AZIN2Q96A70 460 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 GBP5Q96PP8 586 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 NUDCD1Q96RS6 583 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 ZSCAN10Q96SZ4 725 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 LRRC27Q9C0I9 530 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 KANSL2Q9H9L4 492 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 CD320Q9NPF0 282 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 FGFR1OP2Q9NVK5 253 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 TRAFD1O14545 582 aaPredicted RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 IFNAR2P48551 515 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 PTDSS1P48651 473 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 DR1Q01658 176 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 CNTN2Q02246 1040 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 PPARDQ03181 441 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 ITGA7Q13683 1181 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 AUHQ13825 339 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 TTLL4Q14679 1199 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 IFIT1BQ5T764 474 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 C16orf86Q6ZW13 317 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 UNC13DQ70J99 1090 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 ARMCX2Q7L311 632 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 KIAA0895Q8NCT3 520 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 STKLD1Q8NE28 680 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 UTP4Q969X6 686 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 SCLYQ96I15 445 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 MAGEB18Q96M61 343 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 CEP63Q96MT8 703 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 SERPINB12Q96P63 405 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 NR1H4Q96RI1 486 aaPredicted RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 LSM14BQ9BX40 385 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 TEX13BQ9BXU2 312 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 MTIF3Q9H2K0 278 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 ABHD16BQ9H3Z7 469 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 SPC25Q9HBM1 224 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
APTX-216ENST00000472896 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 CIDEBQ9UHD4 219 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 HCN4Q9Y3Q4 1203 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 PCDHGA4Q9Y5G9 962 aa10.74□□□□□ -0.69
APTX-216ENST00000472896 BAZ2AQ9UIF9 1905 aaKnown RBP10.73□□□□□ -0.69
APTX-216ENST00000472896 PODXLO00592 558 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 B4GALT4O60513 344 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 DCTN3O75935 186 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 NOL4O94818 638 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 AFPP02771 609 aaKnown RBP10.73□□□□□ -0.69
APTX-216ENST00000472896 RARGP13631 454 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 PSMC6P62333 389 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 SLC29A2Q14542 456 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 ACBD5Q5T8D3 534 aaPredicted RBP10.73□□□□□ -0.69
APTX-216ENST00000472896 LRRC55Q6ZSA7 311 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
APTX-216ENST00000472896 FAM13CQ8NE31 585 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 HES6Q96HZ4 224 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 MIS12Q9H081 205 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 LRRC4CQ9HCJ2 640 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 DNAAF2Q9NVR5 837 aaKnown RBP10.73□□□□□ -0.69
APTX-216ENST00000472896 IL1RAPL1Q9NZN1 696 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 AMFRQ9UKV5 643 aa10.73□□□□□ -0.69
APTX-216ENST00000472896 ZBBXA8MT70 800 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 MAPK13O15264 365 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 GPR37L1O60883 481 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 GFPT2O94808 682 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 CA3P07451 260 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ITGA4P13612 1032 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 PLCG1P19174 1290 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 CACNA2D1P54289 1103 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 YARSP54577 528 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 MARSP56192 900 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 TNFAIP2Q03169 654 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 RAPGEF1Q13905 1077 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 DBN1Q16643 649 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 RNF220Q5VTB9 566 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ARHGEF18Q6ZSZ5 1173 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 TRMT10CQ7L0Y3 403 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 EXOC3L1Q86VI1 746 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SRBD1Q8N5C6 995 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms