RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ZKSCAN5Q9Y2L8 839 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
CCM2-204ENST00000470837 SSU72P8A0A1W2PR75 194 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 CASTOR2A6NHX0 329 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 MEIS3P2A8K0S8 358 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 KPNA7A9QM74 516 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 FOXN3O00409 490 aaPredicted RBP10.45□□□□□ -0.74
CCM2-204ENST00000470837 PODXLO00592 558 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 ZSCAN12O43309 604 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 HUS1O60921 280 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 UPP2O95045 317 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 FGFR1P11362 822 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 CD58P19256 250 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 TNFAIP3P21580 790 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 CCZ1BP86790 482 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 CCZ1P86791 482 aaPredicted RBP10.45□□□□□ -0.74
CCM2-204ENST00000470837 TMEM270Q6UE05 265 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 DSTYKQ6XUX3 929 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 ZSCAN30Q86W11 494 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 LINC01599Q8WXQ3 324 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 ABHD8Q96I13 439 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 KREMEN1Q96MU8 473 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 XYLT2Q9H1B5 865 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 MTIF3Q9H2K0 278 aaKnown RBP10.45□□□□□ -0.74
CCM2-204ENST00000470837 SNX25Q9H3E2 840 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 KCNF1Q9H3M0 494 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 IL23AQ9NPF7 189 aa10.45□□□□□ -0.74
CCM2-204ENST00000470837 PUF60Q9UHX1 559 aaKnown RBP10.45□□□□□ -0.74
CCM2-204ENST00000470837 ANO9A1A5B4 782 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 SOWAHDA6NJG2 315 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 TBKBP1A7MCY6 615 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 PIRO00625 290 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 INPPL1O15357 1258 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CYP26A1O43174 497 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 B3GAT3O94766 335 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 FGBP02675 491 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 WEE2P0C1S8 567 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CCDC175P0C221 793 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 EIF4A3P38919 411 aaKnown RBP10.44□□□□□ -0.74
CCM2-204ENST00000470837 PRKCIP41743 596 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 OR1G1P47890 313 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 SPOUT1Q5T280 376 aaKnown RBP10.44□□□□□ -0.74
CCM2-204ENST00000470837 DPY19L2P1Q6NXN4 242 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
CCM2-204ENST00000470837 DCLRE1AQ6PJP8 1040 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 METTL23Q86XA0 190 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 FAM71AQ8IYT1 594 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 LRRC43Q8N309 656 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 RBBP8NLQ8NC74 664 aaPredicted RBP10.44□□□□□ -0.74
CCM2-204ENST00000470837 APPL2Q8NEU8 664 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 KAT5Q92993 513 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 ARID3AQ99856 593 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CXCL16Q9H2A7 254 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 HAUS4Q9H6D7 363 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 GOLGA2P5Q9HBQ8 144 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CISHQ9NSE2 258 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 AJAP1Q9UKB5 411 aaPredicted RBP10.44□□□□□ -0.74
CCM2-204ENST00000470837 DSEQ9UL01 958 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 POLIQ9UNA4 740 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 CEP83Q9Y592 693 aa10.44□□□□□ -0.74
CCM2-204ENST00000470837 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 GOLGA6L9A6NEM1 432 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 CYB561D2O14569 222 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 MED7O43513 233 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 KIF4AO95239 1232 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 NDUFA10O95299 355 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 PNMA6AP0CW24 399 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 ACRP10323 421 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 ODC1P11926 461 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 FECHP22830 423 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 GNA15P30679 374 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 ASPAP45381 313 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 CLCNKBP51801 687 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 KIF11P52732 1056 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 LILRA4P59901 499 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 SOX4Q06945 474 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 BMS1Q14692 1282 aaKnown RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 CLLU1OSQ5K130 101 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 WDR59Q6PJI9 974 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 DPH6Q7L8W6 267 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 IRF2BP2Q7Z5L9 587 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 KIAA1328Q86T90 577 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 ZNF677Q86XU0 584 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 TOP6BLQ8N6T0 577 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 GSTCDQ8NEC7 633 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 OR6B3Q8NGW1 331 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 BADQ92934 168 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 ELMO3Q96BJ8 720 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 CHP1Q99653 195 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 COLEC11Q9BWP8 271 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 NT5C1AQ9BXI3 368 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 BCO2Q9BYV7 579 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 SMYD3Q9H7B4 428 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 TBC1D13Q9NVG8 400 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms