RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	C1orf127	Q8N9H9	656 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	ARRDC4	Q8NCT1	418 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	MSANTD4	Q8NCY6	345 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	TPCN2	Q8NHX9	752 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	OLIG1	Q8TAK6	271 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	SLC35G2	Q8TBE7	412 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	CAGE1	Q8TC20	777 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	CD99L2	Q8TCZ2	262 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	SLC20A1	Q8WUM9	679 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	KIF12	Q96FN5	646 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	SNX27	Q96L92	541 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	PACSIN1	Q9BY11	444 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	BCO2	Q9BYV7	579 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	XYLT2	Q9H1B5	865 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	HMX1	Q9NP08	348 aa	Predicted RBP	11.74	□□□□□ -0.53
SND1-208	ENST00000470463	AVEN	Q9NQS1	362 aa	Predicted RBP	11.74	□□□□□ -0.53
SND1-208	ENST00000470463	CISH	Q9NSE2	258 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	DPP3	Q9NY33	737 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	CNTN3	Q9P232	1028 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	PTPN22	Q9Y2R2	807 aa		11.74	□□□□□ -0.53
SND1-208	ENST00000470463	TNRC18	O15417	2968 aa	Predicted RBP	11.74	□□□□□ -0.53
SND1-208	ENST00000470463	MYADML2	A6NDP7	307 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	ENC1	O14682	589 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	TLR3	O15455	904 aa	Known RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CSDE1	O75534	798 aa	Known RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	RPS6KA5	O75582	802 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CYP1A1	P04798	512 aa	Predicted RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	ITGB3	P05106	788 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CYP1A2	P05177	515 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	NFIC	P08651	508 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CHRNB2	P17787	502 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	PAX3	P23760	479 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CCND3	P30281	292 aa	Predicted RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	RAB27A	P51159	221 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CENPC	Q03188	943 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	TMEM62	Q0P6H9	643 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	STIL	Q15468	1287 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	WDR72	Q3MJ13	1102 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CFAP221	Q4G0U5	840 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	FAM47C	Q5HY64	1035 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	ALKAL1	Q6UXT8	129 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	PEX26	Q7Z412	305 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CDR2L	Q86X02	465 aa	Predicted RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	GPIHBP1	Q8IV16	184 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	LRRC57	Q8N9N7	239 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	RUBCN	Q92622	972 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	HPDL	Q96IR7	371 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	ZNF560	Q96MR9	790 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	GLT1D1	Q96MS3	346 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	RPS6KC1	Q96S38	1066 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	OSBPL9	Q96SU4	736 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	MIS12	Q9H081	205 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	MRPL47	Q9HD33	250 aa	Known RBP	11.73	□□□□□ -0.53
SND1-208	ENST00000470463	SLC38A7	Q9NVC3	462 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	CTTNBP2NL	Q9P2B4	639 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	SALL4	Q9UJQ4	1053 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	AMFR	Q9UKV5	643 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	PCDHGC3	Q9UN70	934 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	TFR2	Q9UP52	801 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463	SCIN	Q9Y6U3	715 aa		11.73	□□□□□ -0.53
SND1-208	ENST00000470463		A0A0U1RQG5	324 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TMCO5B	A8MYB1	307 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	THAP12	O43422	761 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	FAM163B	P0C2L3	166 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	UNG	P13051	313 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	KCNE1	P15382	129 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ELN	P15502	786 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ZSCAN20	P17040	1043 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ABCB4	P21439	1286 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	POLR2B	P30876	1174 aa	Known RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ASPA	P45381	313 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TAP1	Q03518	808 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	C1QBP	Q07021	282 aa	Known RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	PTGIS	Q16647	500 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	XKR4	Q5GH76	650 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TAF3	Q5VWG9	929 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	SPOPL	Q6IQ16	392 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	GDF6	Q6KF10	455 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	RSRC2	Q7L4I2	434 aa	Known RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	PHF13	Q86YI8	300 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TMEM192	Q8IY95	271 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TMEM35B	Q8NCS4	154 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ARMC5	Q96C12	935 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	NAP1L3	Q99457	506 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	ARID3A	Q99856	593 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TRAIP	Q9BWF2	469 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	PLVAP	Q9BX97	442 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	TLR10	Q9BXR5	811 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.72	□□□□□ -0.53
SND1-208	ENST00000470463	THAP2	Q9H0W7	228 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	CDHR5	Q9HBB8	845 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	SNTG2	Q9NY99	539 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	SIX4	Q9UIU6	781 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	AGAP1	Q9UPQ3	857 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	NOD1	Q9Y239	953 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	CDY2A	Q9Y6F7	541 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	RALGAPA2	Q2PPJ7	1873 aa		11.72	□□□□□ -0.53
SND1-208	ENST00000470463	KIF4A	O95239	1232 aa		11.71	□□□□□ -0.53
SND1-208	ENST00000470463	CALB1	P05937	261 aa		11.71	□□□□□ -0.53

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