RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZFXP17010 805 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 IYDQ6PHW0 289 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 C3orf62Q6ZUJ4 267 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 MRPL1Q9BYD6 325 aaKnown RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 SELENONQ9NZV5 590 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 DYNC1LI2O43237 492 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 SERPINI2O75830 405 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 TARSP26639 723 aaKnown RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 BAATQ14032 418 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 SNRNP35Q16560 246 aaKnown RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 THAP11Q96EK4 314 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 WNK4Q96J92 1243 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 PKD2L2Q9NZM6 624 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 FXR1P51114 621 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNX27-204ENST00000458013 ASAP3Q8TDY4 903 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 MYMKA6NI61 221 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 UNKQ9C0B0 810 aaKnown RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 ARL2BPQ9Y2Y0 163 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 DPYDQ12882 1025 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 DCAF6Q58WW2 860 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 ELMO3Q96BJ8 720 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 EXOSC4Q9NPD3 245 aaKnown RBP20.58■□□□□ 0.89
SNX27-204ENST00000458013 GTF2H1P32780 548 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 EN1Q05925 392 aaPredicted RBP20.58■□□□□ 0.89
SNX27-204ENST00000458013 VEPH1Q14D04 833 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 DONSONQ9NYP3 566 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 FMO5P49326 533 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 OLFM3Q96PB7 478 aa20.58■□□□□ 0.89
SNX27-204ENST00000458013 COMTP21964 271 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 PBLDP30039 288 aaPredicted RBP20.58■□□□□ 0.88
SNX27-204ENST00000458013 STAT4Q14765 748 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 MAPRE2Q15555 327 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 CCT8L2Q96SF2 557 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 GGPS1O95749 300 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 CYP19A1P11511 503 aaPredicted RBP20.58■□□□□ 0.88
SNX27-204ENST00000458013 SEC24CP53992 1094 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 CCDC157Q569K6 752 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 ARHGEF26Q96DR7 871 aa20.58■□□□□ 0.88
SNX27-204ENST00000458013 SPTLC1O15269 473 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 PIF1Q9H611 641 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 CACNA2D2Q9NY47 1150 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 PRR23D1E9PI22 279 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 PARNO95453 639 aaKnown RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 PRR23D2P0DMB1 279 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 CCZ1BP86790 482 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 CCZ1P86791 482 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 DENND5BQ6ZUT9 1274 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 CHSY1Q86X52 802 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 GUF1Q8N442 669 aaKnown RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 HES6Q96HZ4 224 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.57■□□□□ 0.886e-7■■■□□ 16.5
SNX27-204ENST00000458013 NBPF9Q3BBW0 867 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 ZNF560Q96MR9 790 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 NARFQ9UHQ1 456 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 TTC37Q6PGP7 1564 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 HIST1H2AGP0C0S8 130 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 HIST1H2ADP20671 130 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 SHCBP1Q8NEM2 672 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 SNRNP27Q8WVK2 155 aaKnown RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 HIST1H2AHQ96KK5 128 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 HIST1H2AJQ99878 128 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 H2AFJQ9BTM1 129 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 ZSCAN32Q9NX65 697 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 CFAP73A6NFT4 308 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 E4F1Q66K89 784 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 RAET1EQ8TD07 263 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 C6orf203Q9P0P8 240 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 PSMC3IPQ9P2W1 217 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 MORC2Q9Y6X9 1032 aaPredicted RBP20.57■□□□□ 0.88
SNX27-204ENST00000458013 ZNF521Q96K83 1311 aa20.57■□□□□ 0.88
SNX27-204ENST00000458013 ATP6V1B1P15313 513 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 SERPINB5P36952 375 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 TRIM72Q6ZMU5 477 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 ENDOD1O94919 500 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 NPTXRO95502 500 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 DYNC1I2Q13409 638 aaKnown RBP20.56■□□□□ 0.88
SNX27-204ENST00000458013 ZIM3Q96PE6 472 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 RAP1GAPP47736 663 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 OR1G1P47890 313 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 ARHGAP18Q8N392 663 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 PRRG1O14668 218 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 ALDH6A1Q02252 535 aaKnown RBP20.56■□□□□ 0.88
SNX27-204ENST00000458013 EMC2Q15006 297 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 EPHA7Q15375 998 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 DNAAF5Q86Y56 855 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 CD248Q9HCU0 757 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 SLC39A10Q9ULF5 831 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
SNX27-204ENST00000458013 GLRA4Q5JXX5 417 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 APOBEC3FQ8IUX4 373 aaKnown RBP20.56■□□□□ 0.88
SNX27-204ENST00000458013 MICALL2Q8IY33 904 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 DIS3LQ8TF46 1054 aaKnown RBP20.56■□□□□ 0.88
SNX27-204ENST00000458013 LCMT1Q9UIC8 334 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 DOLKQ9UPQ8 538 aa20.56■□□□□ 0.88
SNX27-204ENST00000458013 ZNF197O14709 1029 aa20.55■□□□□ 0.88
SNX27-204ENST00000458013 ZNF263O14978 683 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms