RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PXMP2Q9NR77 195 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 ZFATQ9P243 1243 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 TTC4O95801 387 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 CYP2C9P11712 490 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 HPDLQ96IR7 371 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 VCX3AQ9NNX9 186 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 ITGB3P05106 788 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 MTMR12Q9C0I1 747 aa23.6■■□□□ 1.37
CTDSPL-206ENST00000443503 POU5F1BQ06416 359 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 AGBL2Q5U5Z8 902 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 PDCD6IPQ8WUM4 868 aaKnown RBP23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 AKT1S1Q96B36 256 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 INTS13Q9NVM9 706 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 GTPBP10A4D1E9 387 aaKnown RBP23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 CFAP69A5D8W1 941 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 ATP5HO75947 161 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 PGK2P07205 417 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 CYP2B6P20813 491 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 MAGEA4P43358 317 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 ITPRIPL1Q6GPH6 555 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 CERS5Q8N5B7 392 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 GPRC5AQ8NFJ5 357 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 ZNF507Q8TCN5 953 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 NOP53Q9NZM5 478 aaKnown RBP23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 BAG5Q9UL15 447 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 CHMP2BQ9UQN3 213 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 KPNA7A9QM74 516 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 GARTP22102 1010 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 RRM1P23921 792 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 ACTN3Q08043 901 aaPredicted RBP23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 EP400NLQ6ZTU2 488 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 SPATA21Q7Z572 469 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 ARHGEF26Q96DR7 871 aa23.59■■□□□ 1.37
CTDSPL-206ENST00000443503 CCL15-CCL14A0A0B4J2E2 113 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 TMEM150BA6NC51 233 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 CCL15Q16663 113 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 BTBD8Q5XKL5 378 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 AFG1LQ8WV93 481 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 PGBD4Q96DM1 585 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 FGFR1OP2Q9NVK5 253 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 GZMAP12544 262 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 SKIP12755 728 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 PAPOLAP51003 745 aaKnown RBP23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 OR6P1Q8NGX9 317 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 ANKZF1Q9H8Y5 726 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 CPSF2Q9P2I0 782 aaKnown RBP23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 WNT10BO00744 389 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 DIAPH2O60879 1101 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 NAMPTP43490 491 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 CACNB2Q08289 660 aaPredicted RBP23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 AIPL1Q9NZN9 384 aa23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 ZC3H7BQ9UGR2 993 aaKnown RBP23.58■■□□□ 1.37
CTDSPL-206ENST00000443503 WNT7AO00755 349 aa23.58■■□□□ 1.36
CTDSPL-206ENST00000443503 PPP1R12AO14974 1030 aaPredicted RBP23.58■■□□□ 1.36
CTDSPL-206ENST00000443503 MFSD14CQ5VZR4 134 aa23.58■■□□□ 1.36
CTDSPL-206ENST00000443503 CEP120Q8N960 986 aa23.58■■□□□ 1.36
CTDSPL-206ENST00000443503 SLC47A2Q86VL8 602 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 ATP8B4Q8TF62 1192 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 GRAMD1AQ96CP6 724 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 SPON2Q9BUD6 331 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 XPO7Q9UIA9 1087 aaKnown RBP23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 TMEM120BA0PK00 339 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 SULT1E1P49888 294 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 TPI1P60174 286 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 CDC42EP1Q00587 391 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 ARL8AQ96BM9 186 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 KLF6Q99612 283 aaPredicted RBP23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 TAC1P20366 129 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 ORC1Q13415 861 aa23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 METTL5Q9NRN9 209 aaKnown RBP23.57■■□□□ 1.36
CTDSPL-206ENST00000443503 MEI1Q5TIA1 1274 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 CYFIP2Q96F07 1278 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 EPAS1Q99814 870 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 FNTAP49354 379 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 FBXO25Q8TCJ0 367 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 KIAA1683Q9H0B3 1180 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 FAM198AQ9UFP1 575 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 LAMC2Q13753 1193 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 GRAMD1BQ3KR37 738 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 TMC2Q8TDI7 906 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 SCG3Q8WXD2 468 aaKnown RBP23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 SMYD3Q9H7B4 428 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 RSAD1Q9HA92 442 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 GTSE1Q9NYZ3 720 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 KCNA1Q09470 495 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 ECT2Q9H8V3 914 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 PSD3Q9NYI0 1048 aa23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 SMG5Q9UPR3 1016 aaKnown RBP23.56■■□□□ 1.36
CTDSPL-206ENST00000443503 CLGNO14967 610 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 TRIM66O15016 1216 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 GLI1P08151 1106 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 PGM5Q15124 567 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 C3orf62Q6ZUJ4 267 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 MDM1Q8TC05 714 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 HAS1Q92839 578 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 FOXP3Q9BZS1 431 aa23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 PABPC3Q9H361 631 aaKnown RBP23.55■■□□□ 1.36
CTDSPL-206ENST00000443503 MAP3K7O43318 606 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms