RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 KDRP35968 1356 aa4.14□□□□□ -1.75
HMGB3P11-201ENST00000440127 CRB1P82279 1406 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 XRN1Q8IZH2 1706 aaKnown RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 TGM5O43548 720 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PRC1O43663 620 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 EIF5BO60841 1220 aaKnown RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PEX14O75381 377 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SCAF4O95104 1147 aaKnown RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 MTHFD2P13995 350 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 DEKP35659 375 aaKnown RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 MANFP55145 182 aaKnown RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 BLOC1S1P78537 153 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 CD69Q07108 199 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 MTMR1Q13613 665 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 ACAP1Q15027 740 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 LRRC41Q15345 812 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PCBP1Q15365 356 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 VPS72Q15906 364 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 KRT24Q2M2I5 525 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 C19orf54Q5BKX5 351 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZBTB41Q5SVQ8 909 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 FNDC7Q5VTL7 733 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 ARMC6Q6NXE6 501 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PLXDC1Q8IUK5 500 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 KCNH5Q8NCM2 988 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PIK3C3Q8NEB9 887 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PROKR1Q8TCW9 393 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 LEO1Q8WVC0 666 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 IP6K1Q92551 441 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 LTV1Q96GA3 475 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZNF496Q96IT1 587 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 C22orf23Q9BZE7 217 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 DCTPP1Q9H773 170 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 IFT22Q9H7X7 185 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 EMC7Q9NPA0 242 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC2A4RGQ9NR83 387 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SPTLC3Q9NUV7 552 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 MIS18AQ9NYP9 233 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 TRPS1Q9UHF7 1281 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 TSPYL4Q9UJ04 414 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SORCS3Q9UPU3 1222 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 PPP2R3BQ9Y5P8 575 aa4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 SOS1Q07889 1333 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P11-201ENST00000440127 NALCNQ8IZF0 1738 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 PEAK1Q9H792 1746 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 A0A1W2PR48 441 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 SHTN1A0MZ66 631 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 PRSS38A1L453 326 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 GPR39O43194 453 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 FAM20BO75063 409 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 RPS6KA4O75676 772 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 SCGB1D2O95969 90 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 HK1P19367 917 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CRHR1P34998 444 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 GNALP38405 381 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CASRP41180 1078 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 ADCYAP1R1P41586 468 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 AVPR1BP47901 424 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCT4P50991 539 aaKnown RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 NEK2P51955 445 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 STRN3Q13033 797 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 STAT4Q14765 748 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 PPP2R5AQ15172 486 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 TAF7Q15545 349 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 BMP2KLQ5H9B9 411 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCDC30Q5VVM6 783 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 BROXQ5VW32 411 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 IGFL4Q6B9Z1 124 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 LAIR1Q6GTX8 287 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCDC62Q6P9F0 684 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 DRICH1Q6PGQ1 229 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 DDX46Q7L014 1031 aaKnown RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 LDLRAD3Q86YD5 345 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 ANKRD44Q8N8A2 993 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 IL17REQ8NFR9 667 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 OR52N2Q8NGI0 321 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZNF480Q8WV37 535 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 LARP4BQ92615 738 aaKnown RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 PMM1Q92871 262 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZG16BQ96DA0 208 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 NDC1Q9BTX1 674 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 STK31Q9BXU1 1019 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 REXO4Q9GZR2 422 aaKnown RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 KCNH6Q9H252 994 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 IKZF4Q9H2S9 585 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 PRSS50Q9UI38 385 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 CDY2AQ9Y6F7 541 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 RTL1A6NKG5 1358 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 RGPD1P0DJD0 1748 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 NPHP4O75161 1426 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 ADGRL3Q9HAR2 1447 aa4.12□□□□□ -1.75
HMGB3P11-201ENST00000440127 RIMS1Q86UR5 1692 aaKnown RBP4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 B3GALT2O43825 422 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 BRINP1O60477 761 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 HMMRO75330 724 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 RBP3P10745 1247 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms