RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PJA1Q8NG27 643 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 CPT1CQ8TCG5 803 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 KBTBD7Q8WVZ9 684 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 TIFAQ96CG3 184 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 ARNT2Q9HBZ2 717 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 TRPM5Q9NZQ8 1165 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 RNF181Q9P0P0 153 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 USP15Q9Y4E8 981 aaPredicted RBP4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 FPGT-TNNI3KV9GXZ4 949 aa4.72□□□□□ -1.65
LSM1P1-201ENST00000438629 A0A1B0GTW7 788 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 ANO9A1A5B4 782 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 A6NNZ2 444 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 GRXCR1A8MXD5 290 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 C1QTNF3-AMACRE9PGA6 284 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 FOXN3O00409 490 aaPredicted RBP4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 RPS6KA4O75676 772 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC7A1P30825 629 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC6A4P31645 630 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 SOX8P57073 446 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 POU6F2P78424 691 aaPredicted RBP4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 HDAC1Q13547 482 aaPredicted RBP4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 TOB2Q14106 344 aaPredicted RBP4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 CCDC146Q8IYE0 955 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 OR56A1Q8NGH5 318 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 OR6B3Q8NGW1 331 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 ANKS1AQ92625 1134 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 EXTL1Q92935 676 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 APIPQ96GX9 242 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 MOGAT1Q96PD6 335 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 GPR20Q99678 358 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 SMOQ99835 787 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 CNPPD1Q9BV87 410 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 IMPG2Q9BZV3 1241 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 ZMAT3Q9HA38 289 aaKnown RBP4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 KIAA1586Q9HCI6 787 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 STAP2Q9UGK3 403 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 MED16Q9Y2X0 877 aa4.71□□□□□ -1.66
LSM1P1-201ENST00000438629 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF785A8K8V0 405 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MYO1CO00159 1063 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 TBC1D4O60343 1298 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 SOAT2O75908 522 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 GPANK1O95872 356 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 AHSGP02765 367 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MYF5P13349 255 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 PEX2P28328 305 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 PSMC1P62191 440 aaKnown RBP4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 SEMA5AQ13591 1074 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC44A4Q53GD3 710 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 NOMO2Q5JPE7 1267 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF783Q6ZMS7 281 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 RNF207Q6ZRF8 634 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 USP37Q86T82 979 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MAPKAPK5Q8IW41 473 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 IL31RAQ8NI17 732 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 IL17DQ8TAD2 202 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MARS2Q96GW9 593 aaKnown RBP4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 BOD1Q96IK1 185 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MRGPRX1Q96LB2 322 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 KLHL32Q96NJ5 620 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 MTO1Q9Y2Z2 717 aaKnown RBP4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 CHST2Q9Y4C5 530 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 PLEKHM1Q9Y4G2 1056 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 NOX1Q9Y5S8 564 aa4.7□□□□□ -1.66
LSM1P1-201ENST00000438629 AHRRA9YTQ3 701 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 B8ZZF3 427 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PLSCR1O15162 318 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF185O15231 689 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PQBP1O60828 265 aaKnown RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ERN1O75460 977 aaKnown RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 CFIP05156 583 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ADRB1P08588 477 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 KITP10721 976 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 XRCC6P12956 609 aaKnown RBP eCLIP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 LAG3P18627 525 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 HDCP19113 662 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 EN2P19622 333 aaPredicted RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 BMPR1AP36894 532 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PHKA1P46020 1223 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF135P52742 658 aaPredicted RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 EXOSC9Q06265 439 aaKnown RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PICALMQ13492 652 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 GALEQ14376 348 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 CDSNQ15517 529 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 CNGA2Q16280 664 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PDCD4Q53EL6 469 aaKnown RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 FAM160B1Q5W0V3 765 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 APOA5Q6Q788 366 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 KRT78Q8N1N4 520 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 SYNE4Q8N205 404 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 TMEM132CQ8N3T6 1108 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 ZNF276Q8N554 614 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 TMIEQ8NEW7 156 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 SLC25A43Q8WUT9 341 aaPredicted RBP4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 PLEKHG4BQ96PX9 1271 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
LSM1P1-201ENST00000438629 TRIM54Q9BYV2 358 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms