RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GNAI1P63096 354 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 PIGFQ07326 219 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 PREPLQ4J6C6 727 aaPredicted RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 FLYWCH1Q4VC44 716 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 SLC4A10Q6U841 1118 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 C3orf20Q8ND61 904 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 SLC17A8Q8NDX2 589 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 TMEM125Q96AQ2 219 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 KLHL32Q96NJ5 620 aa4.41□□□□□ -1.7
CLK1-204ENST00000432425 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
CLK1-204ENST00000432425 PRAMEF33A0A0G2JMD5 474 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 A0A1W2PS29 197 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 PRAMEF10O60809 474 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 ZFPL1O95159 310 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 IL33O95760 270 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 ANXA1P04083 346 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 RPS7P62081 194 aaKnown RBP4.4□□□□□ -1.71
CLK1-204ENST00000432425 MRPS35P82673 323 aaKnown RBP4.4□□□□□ -1.71
CLK1-204ENST00000432425 DSC2Q02487 901 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 FPGSQ05932 587 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 SNAPC2Q13487 334 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 CCDC93Q567U6 631 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 TMEM240Q5SV17 173 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 SP5Q6BEB4 398 aaPredicted RBP4.4□□□□□ -1.71
CLK1-204ENST00000432425 TMIEQ8NEW7 156 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 SSH3Q8TE77 659 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 DMRTA2Q96SC8 542 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 SYNPO2LQ9H987 977 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 KCTD5Q9NXV2 234 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 SLC45A2Q9UMX9 530 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 INSL6Q9Y581 213 aa4.4□□□□□ -1.71
CLK1-204ENST00000432425 hCG_2014768A0A024R1R8 64 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 CCDC195A0A1B0GUA6 201 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 F2RL2O00254 374 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 TOR1BO14657 336 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 PDCP20941 246 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 CYP2C19P33261 490 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 ANAPC15P60006 121 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 PRR16Q569H4 304 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 LNX2Q8N448 690 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 Q8NA96 180 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 PDPRQ8NCN5 879 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 ACTRT2Q8TDY3 377 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 RGMAQ96B86 450 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 GPATCH3Q96I76 525 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 SMOQ99835 787 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 INTS13Q9NVM9 706 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 SIDT1Q9NXL6 827 aaKnown RBP4.39□□□□□ -1.71
CLK1-204ENST00000432425 TLK1Q9UKI8 766 aa4.39□□□□□ -1.71
CLK1-204ENST00000432425 ARHGEF17Q96PE2 2063 aaPredicted RBP4.39□□□□□ -1.71
CLK1-204ENST00000432425 LRRC14BA6NHZ5 514 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 SLC16A6O15403 523 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 PEX1O43933 1283 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 FTH1P19P0C7X4 201 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 VCAM1P19320 739 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 EXOSC10Q01780 885 aaKnown RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 SF3B3Q15393 1217 aaKnown RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 DPY19L2P1Q6NXN4 242 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 ADGRG3Q86Y34 549 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 CFAP52Q8N1V2 620 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 CPA6Q8N4T0 437 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 HSPBAP1Q96EW2 488 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 DUSP26Q9BV47 211 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 KIAA1586Q9HCI6 787 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 SLAMF7Q9NQ25 335 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 CTTNBP2NLQ9P2B4 639 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 CFAP97Q9P2B7 532 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 FEZ2Q9UHY8 353 aaPredicted RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 PCDHA3Q9Y5H8 950 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 ORC4O43929 436 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 FTLP02792 175 aaPredicted RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 PIK3CGP48736 1102 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 ANXA11P50995 505 aaKnown RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 NEK2P51955 445 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 PSMC1P62191 440 aaKnown RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 NOGQ13253 232 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 ZNF169Q14929 603 aaPredicted RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 CD300EQ496F6 205 aaPredicted RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 TAPT1Q6NXT6 567 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 USP45Q70EL2 814 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 PDSS2Q86YH6 399 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 SIMC1Q8NDZ2 872 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 NSUN7Q8NE18 718 aaKnown RBP4.38□□□□□ -1.71
CLK1-204ENST00000432425 SNX19Q92543 992 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 SCAMP4Q969E2 229 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 HEPHQ9BQS7 1158 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 WDCPQ9H6R7 721 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 AASDHPPTQ9NRN7 309 aa4.38□□□□□ -1.71
CLK1-204ENST00000432425 COL11A2P13942 1736 aaPredicted RBP4.37□□□□□ -1.71
CLK1-204ENST00000432425 NT5C1B-RDH14C9J2C7 533 aa4.37□□□□□ -1.71
CLK1-204ENST00000432425 POLRMTO00411 1230 aaKnown RBP4.37□□□□□ -1.71
CLK1-204ENST00000432425 SUN1O94901 812 aa4.37□□□□□ -1.71
CLK1-204ENST00000432425 GJB1P08034 283 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms