RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CDR2Q01850 454 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 HADHQ16836 314 aaKnown RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 ZBTB41Q5SVQ8 909 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 NAA35Q5VZE5 725 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 APBB2Q92870 758 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CAPZA3Q96KX2 299 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 COLEC11Q9BWP8 271 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ARHGAP20Q9P2F6 1191 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 LCMT1Q9UIC8 334 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 JRKLQ9Y4A0 524 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 HYOU1Q9Y4L1 999 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CAPN9O14815 690 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ERLIN1O75477 346 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 C4BPAP04003 597 aaKnown RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 PNMA6AP0CW24 399 aaPredicted RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 CYP11B1P15538 503 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 PAX3P23760 479 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 MCM3P25205 808 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CTGFP29279 349 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CCL23P55773 120 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 APBA1Q02410 837 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 MESDQ14696 234 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 SLC24A5Q71RS6 500 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 MRPL9Q9BYD2 267 aaKnown RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 ADAMTS10Q9H324 1103 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 SQORQ9Y6N5 450 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 UMODL1Q5DID0 1318 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 LOC285556D6RIA3 1793 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 GOLGA8SH3BPF8 625 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ADCY6O43306 1168 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ASS1P00966 412 aaKnown RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 POMCP01189 267 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ODC1P11926 461 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 MLH1P40692 756 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 ZNF618Q5T7W0 954 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 OR6B2Q6IFH4 312 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 FAM228AQ86W67 206 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 CEP57Q86XR8 500 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 SIX6OS1Q8N1H7 587 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 TMEM199Q8N511 208 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 LRRC52Q8N7C0 313 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 KLHDC9Q8NEP7 349 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 C11orf70Q9BRQ4 267 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 EIF2AQ9BY44 585 aaKnown RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 RRAGDQ9NQL2 400 aaPredicted RBP7.89□□□□□ -1.15
BDNF-209ENST00000420794 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 NAGPAQ9UK23 515 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 INTUQ9ULD6 942 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 COQ4Q9Y3A0 265 aa7.89□□□□□ -1.15
BDNF-209ENST00000420794 TRPM7Q96QT4 1865 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 UQCRHLA0A096LP55 91 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 KPNA7A9QM74 516 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 CYB561D2O14569 222 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 EPHB6O15197 1021 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 MOCS3O95396 460 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 UQCRHP07919 91 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 PLEKP08567 350 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 HNRNPH3P31942 346 aaKnown RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 PRKCIP41743 596 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 ALDH7A1P49419 539 aaKnown RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 RNASE9P60153 205 aaKnown RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 CFAP221Q4G0U5 840 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 MARCH8Q5T0T0 291 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 RFFLQ8WZ73 363 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 BAP1Q92560 729 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 FAM149B1Q96BN6 582 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 FERMT1Q9BQL6 677 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 TSPYL2Q9H2G4 693 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 DSEQ9UL01 958 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 BARX2Q9UMQ3 279 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 KAT6AQ92794 2004 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 COL11A1P12107 1806 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 A0A087X0T9 212 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 CEP104O60308 925 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 GPR32O75388 356 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 SGPL1O95470 568 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 PDGFRBP09619 1106 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 FAM228BP0C875 321 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 VDRP11473 427 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 GZMAP12544 262 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 GALCP54803 685 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 ARPP19P56211 112 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 SLC10A6Q3KNW5 377 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 FAM43BQ6ZT52 329 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 ZSWIM2Q8NEG5 633 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 SHC3Q92529 594 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 WDR35Q9P2L0 1181 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 PRG3Q9Y2Y8 225 aaPredicted RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 OTOFQ9HC10 1997 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 SMIM28A0A1B0GU29 152 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 ALDH2P05091 517 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 CAPN2P17655 700 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 RPL9P32969 192 aaKnown RBP7.88□□□□□ -1.15
BDNF-209ENST00000420794 LHX1P48742 406 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 SCNN1GP51170 649 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 TLE2Q04725 743 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 MTFR1Q15390 333 aa7.88□□□□□ -1.15
BDNF-209ENST00000420794 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms