RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 NFKB2Q00653 900 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 TAP1Q03518 808 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 LRRC41Q15345 812 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 PIK3R6Q5UE93 754 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 CD276Q5ZPR3 534 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 PSRC1Q6PGN9 363 aaPredicted RBP6.29□□□□□ -1.4
CSTF1-202ENST00000415828 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 MCM10Q7L590 875 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 PROSER1Q86XN7 944 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF341Q9BYN7 854 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
CSTF1-202ENST00000415828 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 ARHGAP28Q9P2N2 729 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
CSTF1-202ENST00000415828 LAMA1P25391 3075 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 CLASP2O75122 1294 aaKnown RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 RFPL3O75679 317 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 GLRX3O76003 335 aaKnown RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 FBXO21O94952 628 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 NPTXRO95502 500 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 CYP2C19P33261 490 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 GJA4P35212 333 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 PFKPQ01813 784 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 SKIDA1Q1XH10 827 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 MCTP2Q6DN12 878 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 FSTL4Q6MZW2 842 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 HHIPL2Q6UWX4 724 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 UBE2R2Q712K3 238 aaPredicted RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 FASTKD5Q7L8L6 764 aaKnown RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 DHX37Q8IY37 1157 aaKnown RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 TMEM105Q8N8V8 129 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 ARHGAP20Q9P2F6 1191 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
CSTF1-202ENST00000415828 ZNF112Q9UJU3 913 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 AFG3L2Q9Y4W6 797 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 ZHX2Q9Y6X8 837 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 MYH13Q9UKX3 1938 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 MYO9AB2RTY4 2548 aa6.28□□□□□ -1.4
CSTF1-202ENST00000415828 MCM3APO60318 1980 aa6.27□□□□□ -1.4
CSTF1-202ENST00000415828 UTYO14607 1347 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 UMODL1Q5DID0 1318 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CELSR3Q9NYQ7 3312 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 K7ESM1 405 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 HIP1RO75146 1068 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CYP7B1O75881 506 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 FGBP02675 491 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CYP2C18P33260 490 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 NEK4P51957 841 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 DMWDQ09019 674 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 DBPQ10586 325 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 EFEMP1Q12805 493 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 SPATS1Q496A3 300 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CDCA2Q69YH5 1023 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 PKN3Q6P5Z2 889 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 GIMAP6Q6P9H5 292 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 TRMT10BQ6PF06 316 aaKnown RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 DTX3Q8N9I9 347 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 SIN3AQ96ST3 1273 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 PORCNQ9H237 461 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 L2HGDHQ9H9P8 463 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 TXNRD2Q9NNW7 524 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CD209Q9NNX6 404 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 CABP5Q9NP86 173 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 IL23AQ9NPF7 189 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 ZFP69BQ9UJL9 534 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 AGTPBP1Q9UPW5 1226 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 SHROOM3Q8TF72 1996 aa6.27□□□□□ -1.41
CSTF1-202ENST00000415828 UBR5O95071 2799 aaPredicted RBP6.27□□□□□ -1.41
CSTF1-202ENST00000415828 TRIM75PA6NK02 468 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 ZNF839A8K0R7 811 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 SNAP23O00161 211 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 KPNA6O60684 536 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 C4BPAP04003 597 aaKnown RBP6.26□□□□□ -1.41
CSTF1-202ENST00000415828 CYBAP13498 195 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 ATP2A2P16615 1042 aaKnown RBP6.26□□□□□ -1.41
CSTF1-202ENST00000415828 RGS2P41220 211 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 MLLT6P55198 1093 aaPredicted RBP6.26□□□□□ -1.41
CSTF1-202ENST00000415828 IRF9Q00978 393 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 SIGLEC14Q08ET2 396 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 AIMP1Q12904 312 aaKnown RBP6.26□□□□□ -1.41
CSTF1-202ENST00000415828 SEC23AQ15436 765 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 CLUL1Q15846 466 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 FAM47AQ5JRC9 791 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 COPS6Q7L5N1 327 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 ANKRD33Q7Z3H0 272 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 GGNQ86UU5 652 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 NOSTRINQ8IVI9 506 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 KCNG4Q8TDN1 519 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 SOCS4Q8WXH5 440 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 NINJ1Q92982 152 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 FEZ1Q99689 392 aa6.26□□□□□ -1.41
CSTF1-202ENST00000415828 TACO1Q9BSH4 297 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms