RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 FAM189A1O60320 539 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 CALCOCO2Q13137 446 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 MOGSQ13724 837 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 SPATA21Q7Z572 469 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 VSIG10LQ86VR7 867 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 KATNAL2Q8IYT4 538 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 OSBPL8Q9BZF1 889 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 KANSL3Q9P2N6 904 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 TJP2Q9UDY2 1190 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 BAIAP2L1Q9UHR4 511 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 DOCK1Q14185 1865 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 A0A1W2PPM1 405 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 TESPA1A2RU30 521 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 SPAG7O75391 227 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 CST3P01034 146 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 CCNB1P14635 433 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ADCY8P40145 1251 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 GPX6P59796 221 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 COPS2P61201 443 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 RNASELQ05823 741 aaKnown RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 DMP1Q13316 513 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 EFTUD2Q15029 972 aaKnown RBP eCLIP10.47□□□□□ -0.735e-13■■■■■ 88.9
SS18-203ENST00000415083 CCNG2Q16589 344 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 P3H1Q32P28 736 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 TRABD2AQ86V40 505 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 N4BP2L2Q92802 583 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 TGS1Q96RS0 853 aaKnown RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 TIPINQ9BVW5 301 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 C12orf65Q9H3J6 166 aaKnown RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 KIAA1586Q9HCI6 787 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 SAMD15Q9P1V8 674 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 CHKBQ9Y259 395 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ADGRA2Q96PE1 1338 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 F8VP50 259 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 THAP12O43422 761 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 PEX10O60683 326 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ELF1P32519 619 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ZNF132P52740 706 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 TRAF1Q13077 416 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 PSMD6Q15008 389 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 MTFR1Q15390 333 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 SLC1A5Q15758 541 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 PLEKHG4Q58EX7 1191 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 SWSAP1Q6NVH7 229 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 KIAA0319LQ8IZA0 1049 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 SLITRK1Q96PX8 696 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 KCNK9Q9NPC2 374 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 ADAM22Q9P0K1 906 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 NKX1-2Q9UD57 310 aaPredicted RBP10.47□□□□□ -0.73
SS18-203ENST00000415083 PCDHB2Q9Y5E7 798 aa10.47□□□□□ -0.73
SS18-203ENST00000415083 APBA3O96018 575 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ATF2P15336 505 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 OASLQ15646 514 aaKnown RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 PPP1R15BQ5SWA1 713 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ABHD15Q6UXT9 468 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 TAOK1Q7L7X3 1001 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 NLRX1Q86UT6 975 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 FAM83AQ86UY5 434 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ERICH1Q86X53 443 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ABRAQ8N0Z2 381 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ZCCHC9Q8N567 271 aaKnown RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 MTMR14Q8NCE2 650 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 MZB1Q8WU39 189 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 MAGEB18Q96M61 343 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 SAE1Q9UBE0 346 aaPredicted RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 IVNS1ABPQ9Y6Y0 642 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 CENPFP49454 3210 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 CLUHO75153 1309 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 VWA5AO00534 786 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 HNRNPDLO14979 420 aaKnown RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 WDR46O15213 610 aaKnown RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 GARTP22102 1010 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 CDC25CP30307 473 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 MAGEA4P43358 317 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 JAK3P52333 1124 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 NRLP54845 237 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 GDF10P55107 478 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 PNMA8AQ86V59 439 aaPredicted RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 PHF13Q86YI8 300 aaPredicted RBP10.46□□□□□ -0.73
SS18-203ENST00000415083 ANKS4BQ8N8V4 417 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 MYLK2Q9H1R3 596 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 ATP6V0A4Q9HBG4 840 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 RXFP1Q9HBX9 757 aa10.46□□□□□ -0.73
SS18-203ENST00000415083 A0A0G2JMZ2 1700 aa10.46□□□□□ -0.74
SS18-203ENST00000415083 LRRC37A2A6NM11 1700 aa10.46□□□□□ -0.74
SS18-203ENST00000415083 MAGEB2O15479 319 aa10.46□□□□□ -0.74
SS18-203ENST00000415083 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.74
SS18-203ENST00000415083 SLC1A1P43005 524 aa10.46□□□□□ -0.74
SS18-203ENST00000415083 MTMR2Q13614 643 aa10.46□□□□□ -0.74
SS18-203ENST00000415083 CUL2Q13617 745 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms