RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ILDR2Q71H61 639 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 ADPGKQ9BRR6 497 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 ZCCHC17Q9NP64 241 aaKnown RBP22.07■■□□□ 1.12
USP39-203ENST00000409470 PCDHA3Q9Y5H8 950 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 MROH7Q68CQ1 1323 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 ASPAP45381 313 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 KIZQ2M2Z5 673 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 LLGL2Q6P1M3 1020 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 TLK2Q86UE8 772 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 PHF13Q86YI8 300 aaPredicted RBP22.06■■□□□ 1.12
USP39-203ENST00000409470 CAVIN3Q969G5 261 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 VCPIP1Q96JH7 1222 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 FAM49AQ9H0Q0 323 aaPredicted RBP22.06■■□□□ 1.12
USP39-203ENST00000409470 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
USP39-203ENST00000409470 GINS2Q9Y248 185 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 DOCK3Q8IZD9 2030 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 MYO1FO00160 1098 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 BRD2P25440 801 aaKnown RBP22.06■■□□□ 1.12
USP39-203ENST00000409470 CYP2C19P33261 490 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 POU5F1Q01860 360 aaKnown RBP22.06■■□□□ 1.12
USP39-203ENST00000409470 PPP2R5EQ16537 467 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 ZNF667Q5HYK9 610 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 MMS22LQ6ZRQ5 1243 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 C1orf127Q8N9H9 656 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 ASB7Q9H672 318 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 SIX4Q9UIU6 781 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 POLIQ9UNA4 740 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 NR2E1Q9Y466 385 aa22.06■■□□□ 1.12
USP39-203ENST00000409470 MGAMO43451 1857 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 ITGB3P05106 788 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 SMIM10L2AP0DMW4 78 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 SMIM10L2BP0DMW5 78 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 CYP2B6P20813 491 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 FGFR4P22455 802 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 RWDD2BP57060 319 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 TMEM62Q0P6H9 643 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 OLFML2BQ68BL8 750 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 LENG1Q96BZ8 264 aaPredicted RBP22.05■■□□□ 1.12
USP39-203ENST00000409470 TRIM7Q9C029 511 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 MRPL47Q9HD33 250 aaKnown RBP22.05■■□□□ 1.12
USP39-203ENST00000409470 TRPM7Q96QT4 1865 aa22.05■■□□□ 1.12
USP39-203ENST00000409470 MEFVO15553 781 aaPredicted RBP22.04■■□□□ 1.12
USP39-203ENST00000409470 F2P00734 622 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 ZNF865P0CJ78 1059 aaPredicted RBP22.04■■□□□ 1.12
USP39-203ENST00000409470 PYGMP11217 842 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 HSPA6P17066 643 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 C1QBPQ07021 282 aaKnown RBP22.04■■□□□ 1.12
USP39-203ENST00000409470 NNTQ13423 1086 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 IRF5Q13568 498 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 TRADDQ15628 312 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 CCL14Q16627 93 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 SLC10A6Q3KNW5 377 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 WDR72Q3MJ13 1102 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 RGMBQ6NW40 437 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 PPP1R13LQ8WUF5 828 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 ACAP3Q96P50 834 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 NRCAMQ92823 1304 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 A0A1B0GUA9 196 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 TTI1O43156 1089 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 HLTFQ14527 1009 aaKnown RBP eCLIP22.04■■□□□ 1.12
USP39-203ENST00000409470 MED4Q9NPJ6 270 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 SCINQ9Y6U3 715 aa22.04■■□□□ 1.12
USP39-203ENST00000409470 LSM8O95777 96 aaKnown RBP22.03■■□□□ 1.12
USP39-203ENST00000409470 SLC1A1P43005 524 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 RAP1GAPP47736 663 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 AARSP49588 968 aaKnown RBP eCLIP22.03■■□□□ 1.12
USP39-203ENST00000409470 FAM193AP78312 1265 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 LACTBP83111 547 aaPredicted RBP22.03■■□□□ 1.12
USP39-203ENST00000409470 CUL1Q13616 776 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 TMEM132DQ14C87 1099 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 C17orf99Q6UX52 265 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 IFNL1Q8IU54 200 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 CELF4Q9BZC1 486 aaKnown RBP22.03■■□□□ 1.12
USP39-203ENST00000409470 GCOM2Q9BZD3 368 aaPredicted RBP22.03■■□□□ 1.12
USP39-203ENST00000409470 ERVK-5Q9HDB9 667 aa22.03■■□□□ 1.12
USP39-203ENST00000409470 RGS2P41220 211 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 GUCY2FP51841 1108 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 MAMLD1Q13495 774 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 MFSD10Q14728 455 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 SAPCD2Q86UD0 394 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 TMEM130Q8N3G9 435 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 TMEM35BQ8NCS4 154 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 FAM71BQ8TC56 605 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 KAT2BQ92831 832 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 PLVAPQ9BX97 442 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 ADAMTS10Q9H324 1103 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 UTP11Q9Y3A2 253 aaKnown RBP22.02■■□□□ 1.12
USP39-203ENST00000409470 GOLGA6BA6NDN3 693 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 FAM153BP0C7A2 387 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 CDC42EP1Q00587 391 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 PTP4A2Q12974 167 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 TERF2Q15554 542 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 FAM153CQ494X1 144 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 C1orf131Q8NDD1 294 aaKnown RBP22.02■■□□□ 1.12
USP39-203ENST00000409470 WHAMMQ8TF30 809 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 USP6NLQ92738 828 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 AP5M1Q9H0R1 490 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 PARVAQ9NVD7 372 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 FAM153AQ9UHL3 310 aa22.02■■□□□ 1.12
USP39-203ENST00000409470 CEP83Q9Y592 693 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms