RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ADAM22Q9P0K1 906 aa19.82■□□□□ 0.76
SIL1-202ENST00000394817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.82■□□□□ 0.76
SIL1-202ENST00000394817 SCINQ9Y6U3 715 aa19.82■□□□□ 0.76
SIL1-202ENST00000394817 CST3P01034 146 aaPredicted RBP19.81■□□□□ 0.76
SIL1-202ENST00000394817 C2CD6Q53TS8 623 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 MPZL3Q6UWV2 235 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 CCDC105Q8IYK2 499 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 SHCBP1Q8NEM2 672 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 MAIP1Q8WWC4 291 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 DDX27Q96GQ7 796 aaKnown RBP19.81■□□□□ 0.76
SIL1-202ENST00000394817 FAM129AQ9BZQ8 928 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 PTPRHQ9HD43 1115 aa19.81■□□□□ 0.76
SIL1-202ENST00000394817 ACKR2O00590 384 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 HBP1O60381 514 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 PLTPP55058 493 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 EIF3BP55884 814 aaKnown RBP19.8■□□□□ 0.76
SIL1-202ENST00000394817 MAMLD1Q13495 774 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 TFDP1Q14186 410 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 DUOXA2Q1HG44 320 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 SCARA3Q6AZY7 606 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 FOXR1Q6PIV2 292 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 RHPN2Q8IUC4 686 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 COPS5Q92905 334 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 NIF3L1Q9GZT8 377 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 FZD8Q9H461 694 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 ATP8A1Q9Y2Q0 1164 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 PASKQ96RG2 1323 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 PSTPIP1O43586 416 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 HOXC6P09630 235 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 TXNP10599 105 aaKnown RBP19.8■□□□□ 0.76
SIL1-202ENST00000394817 ATP1A2P50993 1020 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 TTLL4Q14679 1199 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 AGBL2Q5U5Z8 902 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 SPRYD7Q5W111 196 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 CST9Q5W186 159 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 PHLDB2Q86SQ0 1253 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 GPRC5AQ8NFJ5 357 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 ZNF606Q8WXB4 792 aa19.8■□□□□ 0.76
SIL1-202ENST00000394817 ECEL1O95672 775 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 NUDT17P0C025 328 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 MYL6P60660 151 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 PDCLQ13371 301 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 SGSM1Q2NKQ1 1148 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 SGO2Q562F6 1265 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 MMS22LQ6ZRQ5 1243 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.79■□□□□ 0.76
SIL1-202ENST00000394817 TRAPPC12Q8WVT3 735 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 EPB41L4BQ9H329 900 aa19.79■□□□□ 0.76
SIL1-202ENST00000394817 ASB14A6NK59 587 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 LSM8O95777 96 aaKnown RBP19.78■□□□□ 0.76
SIL1-202ENST00000394817 MMP8P22894 467 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 MAN1A1P33908 653 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 PMS2P54278 862 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 ZNF568Q3ZCX4 644 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 ATF7IP2Q5U623 682 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 ANKRD23Q86SG2 305 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 NLRP4Q96MN2 994 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 PTPN18Q99952 460 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 NFKBIZQ9BYH8 718 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 PABPC3Q9H361 631 aaKnown RBP19.78■□□□□ 0.76
SIL1-202ENST00000394817 MTRF1LQ9UGC7 380 aaKnown RBP19.78■□□□□ 0.76
SIL1-202ENST00000394817 SLC45A1Q9Y2W3 748 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 ZEB2O60315 1214 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 B4GALT4O60513 344 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 SSTR3P32745 418 aaPredicted RBP19.78■□□□□ 0.76
SIL1-202ENST00000394817 RHOT1Q8IXI2 618 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 ARFGAP2Q8N6H7 521 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 FAM212AQ96EL1 285 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 CISHQ9NSE2 258 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 PARVAQ9NVD7 372 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 PTPN22Q9Y2R2 807 aa19.78■□□□□ 0.76
SIL1-202ENST00000394817 TRPM7Q96QT4 1865 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 ASAP2O43150 1006 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 GJB1P08034 283 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 TMEM191BP0C7N4 346 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 KCNJ1P48048 391 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 CLCN3P51790 818 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 TMEM63BQ5T3F8 832 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 EFCAB12Q6NXP0 572 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 KATNAL2Q8IYT4 538 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 GTF3C2Q8WUA4 911 aaPredicted RBP19.77■□□□□ 0.76
SIL1-202ENST00000394817 ART4Q93070 314 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 CENPHQ9H3R5 247 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 PDGFCQ9NRA1 345 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 ERAP1Q9NZ08 941 aa19.77■□□□□ 0.76
SIL1-202ENST00000394817 INO80B-WBP1J3KQ70 363 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 C22orf31O95567 290 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 TFAMQ00059 246 aaKnown RBP19.76■□□□□ 0.75
SIL1-202ENST00000394817 TRPC3Q13507 836 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 TTC19Q6DKK2 380 aaPredicted RBP19.76■□□□□ 0.75
SIL1-202ENST00000394817 SYDE1Q6ZW31 735 aaPredicted RBP19.76■□□□□ 0.75
SIL1-202ENST00000394817 ARMCX2Q7L311 632 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 FEZF2Q8TBJ5 459 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 HERPUD2Q9BSE4 406 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 INO80BQ9C086 356 aaPredicted RBP19.76■□□□□ 0.75
SIL1-202ENST00000394817 XYLT2Q9H1B5 865 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 TNFSF13BQ9Y275 285 aa19.76■□□□□ 0.75
SIL1-202ENST00000394817 TLR3O15455 904 aaKnown RBP19.76■□□□□ 0.75
SIL1-202ENST00000394817 B4GALT5O43286 388 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms