RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 A0A1B0GTW7 788 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 PRR5-ARHGAP8B1AHC4 643 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 C9IYK1 514 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L15C9J2P7 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L13C9JLJ4 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 DIRC3C9JPN6 131 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L12C9JPN9 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L11C9JVI0 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L21D6R901 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L18D6R9N7 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L22D6RA61 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L17D6RBQ6 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L19D6RCP7 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L20D6RJB6 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 GCOM1H8Y6P7 765 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ACOT7O00154 380 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TULP1O00294 542 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 SCAMP3O14828 347 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NPC1O15118 1278 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 MPPED1O15442 326 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 KCNN4O15554 427 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CTIFO43310 598 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 PI15O43692 258 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 UGDHO60701 494 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 VAMP4O75379 141 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 JTBO76095 146 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 URI1O94763 535 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NDUFB8O95169 186 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 HTR3BO95264 441 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TTLL1O95922 423 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 IGKV1-17P01599 117 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 KLKB1P03952 638 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ZCCHC18P0CG32 403 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 VSIG10L2P0DP72 767 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NR2F6P10588 404 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CTSAP10619 480 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TRIM27P14373 513 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ZNF19P17023 458 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CAPN2P17655 700 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 RXRAP19793 462 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NR1D1P20393 614 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 UBA1P22314 1058 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 FGFR4P22455 802 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 GPTP24298 496 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 SHC1P29353 583 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TLX1P31314 330 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 SOX11P35716 441 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CASRP41180 1078 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ECI1P42126 302 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 KIR3DL2P43630 455 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 PCYT1AP49585 367 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CARSP49589 748 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 VAV2P52735 878 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CHN2P52757 468 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 RPL11P62913 178 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 PHEXP78562 749 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 HSD11B2P80365 405 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 POU5F1Q01860 360 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 MEF2BQ02080 365 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ID2Q02363 134 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ZFP36L1Q07352 338 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 EHHADHQ08426 723 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 PDE4DQ08499 809 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 USP17L24Q0WX57 530 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 KIF5AQ12840 1032 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 COX10Q12887 443 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 SF3A2Q15428 464 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 OCLNQ16625 522 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CYP2A13Q16696 494 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ANO6Q4KMQ2 910 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TAF1BQ53T94 588 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 MANEAQ5SRI9 462 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TDRD10Q5VZ19 366 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TSHZ3Q63HK5 1081 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 KANK2Q63ZY3 851 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 DCAF15Q66K64 600 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NUGGCQ68CJ6 796 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ANKS6Q68DC2 871 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TTC19Q6DKK2 380 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 FCRL6Q6DN72 434 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 GRAMD4Q6IC98 578 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ANO7Q6IWH7 933 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ARMC6Q6NXE6 501 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CEP85Q6P2H3 762 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 VWA1Q6PCB0 445 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TFAP2EQ6VUC0 442 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 NAPRTQ6XQN6 538 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TIFABQ6ZNK6 161 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 Q6ZR54 194 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 BARGINQ6ZT62 677 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 RFX8Q6ZV50 586 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 H1FNTQ75WM6 255 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 TRMT1LQ7Z2T5 733 aaKnown RBP-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 ADGRD2Q7Z7M1 963 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 FAM83AQ86UY5 434 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 C7orf61Q8IZ16 206 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 CMTM4Q8IZR5 234 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 FANCBQ8NB91 859 aa-0.36□□□□□ -2.47
RNU6-1250P-201ENST00000391218 POC1AQ8NBT0 407 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms