RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 COLGALT2Q8IYK4 626 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 GRAMD1CQ8IYS0 662 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 FUBP1Q96AE4 644 aaKnown RBP7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 KLHL32Q96NJ5 620 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 TTPALQ9BTX7 342 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 IMPG2Q9BZV3 1241 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 SLC12A5Q9H2X9 1139 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 RLIMQ9NVW2 624 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 SLC45A2Q9UMX9 530 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 NEU2Q9Y3R4 380 aa7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.21
SNORA40.4-201ENST00000390971 U2AF1L5P0DN76 240 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 TYRP14679 529 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 KRT4P19013 534 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 U2AF1Q01081 240 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 CYP2A13Q16696 494 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 SLC17A8Q8NDX2 589 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 SCAMP4Q969E2 229 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 CDK5RAP3Q96JB5 506 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 TLR10Q9BXR5 811 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 NMRK2Q9NPI5 230 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 PNPOQ9NVS9 261 aa7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 FEZ2Q9UHY8 353 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.4-201ENST00000390971 RHOBTB3O94955 611 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 GCP02774 474 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 GJB1P08034 283 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 EGR2P11161 476 aaPredicted RBP7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 IL12RB1P42701 662 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 AVPR1BP47901 424 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 PIGFQ07326 219 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 TPH2Q8IWU9 490 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 Q8NA96 180 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 SUPT20HQ8NEM7 779 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 TMIEQ8NEW7 156 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 NACC2Q96BF6 587 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 CHFRQ96EP1 664 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 TBCCD1Q9NVR7 557 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 TESQ9UGI8 421 aaKnown RBP7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 CDYLQ9Y232 598 aa7.5□□□□□ -1.21
SNORA40.4-201ENST00000390971 A0A087X1B8 175 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 H3BUI4 141 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 HKR1P10072 659 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 POU6F2P78424 691 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 PURAQ00577 322 aaKnown RBP7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 NFE2Q16621 373 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 CLNKQ7Z7G1 428 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 GPR149Q86SP6 731 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 CHPFQ8IZ52 775 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 CFAP52Q8N1V2 620 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 SH2D3CQ8N5H7 860 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 SLC35G2Q8TBE7 412 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 DIS3LQ8TF46 1054 aaKnown RBP7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 ASB10Q8WXI3 467 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 COQ10AQ96MF6 247 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 MRPL46Q9H2W6 279 aaKnown RBP7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 ZDHHC8Q9ULC8 765 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 NR2E3Q9Y5X4 410 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 EID1Q9Y6B2 187 aa7.49□□□□□ -1.21
SNORA40.4-201ENST00000390971 GRID2IPA4D2P6 1211 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 CHEK2O96017 543 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 ALDH2P05091 517 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 ITGAMP11215 1152 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 KCNA2P16389 499 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 LPOP22079 712 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 TGM1P22735 817 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 VAV2P52735 878 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 ZNF267Q14586 743 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 KIF22Q14807 665 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 SP5Q6BEB4 398 aaPredicted RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 CXorf57Q6NSI4 855 aaKnown RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 Q6YL49 198 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 RAVER1Q8IY67 606 aaKnown RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 CAMKK1Q8N5S9 505 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 PDPRQ8NCN5 879 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 JDP2Q8WYK2 163 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 LRGUKQ96M69 825 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 CGRRF1Q99675 332 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 SIK2Q9H0K1 926 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 IKZF4Q9H2S9 585 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 GPR35Q9HC97 309 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 SLAMF7Q9NQ25 335 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
SNORA40.4-201ENST00000390971 PRAMEF33A0A0G2JMD5 474 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 CCDC195A0A1B0GUA6 201 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 A0A1W2PS29 197 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PRSS29PA6NIE9 313 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PRAMEF10O60809 474 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 RARBP10826 455 aa7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 PSMC1P62191 440 aaKnown RBP7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 NKX6-1P78426 367 aaPredicted RBP7.47□□□□□ -1.21
SNORA40.4-201ENST00000390971 FPGSQ05932 587 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms