RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 H2AFY2Q9P0M6 372 aaPredicted RBP14.36□□□□□ -0.11
COL4A1-201ENST00000375820 ENDOD1O94919 500 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 KCNJ1P48048 391 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 GALCP54803 685 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 ALDH6A1Q02252 535 aaKnown RBP14.36□□□□□ -0.11
COL4A1-201ENST00000375820 MROH9Q5TGP6 573 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 ICE2Q659A1 982 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 SCFD1Q8WVM8 642 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 WNK4Q96J92 1243 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 PLEKHA8Q96JA3 519 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 OSBPL10Q9BXB5 764 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 SLC30A1Q9Y6M5 507 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 H0YC42 278 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 SLC9A1P19634 815 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 CHRM3P20309 590 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 RBBP8NLQ8NC74 664 aaPredicted RBP14.36□□□□□ -0.11
COL4A1-201ENST00000375820 JADE3Q92613 823 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 HES6Q96HZ4 224 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 KLK14Q9P0G3 267 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 NBNO60934 754 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 ALFQ53S48 1182 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 GTF2A1LQ9UNN4 478 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 CDYLQ9Y232 598 aa14.36□□□□□ -0.11
COL4A1-201ENST00000375820 CAB39Q9Y376 341 aaPredicted RBP14.36□□□□□ -0.11
COL4A1-201ENST00000375820 SPTLC1O15269 473 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PBLDP30039 288 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 DHX34Q14147 1143 aaKnown RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PRPF39Q86UA1 669 aaKnown RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 RCOR2Q8IZ40 523 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 C10orf53Q8N6V4 93 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 TPST1O60507 370 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PLA2G4AP47712 749 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 MEI1Q5TIA1 1274 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 TEX9Q8N6V9 391 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PNKPQ96T60 521 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 APEX2Q9UBZ4 518 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 ZBTB22O15209 634 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 KRT8P05787 483 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 BRD2P25440 801 aaKnown RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 KCNJ6P48051 423 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PPP1R18Q6NYC8 613 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 C3orf62Q6ZUJ4 267 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 SH3TC2Q8TF17 1288 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 MYO3BQ8WXR4 1341 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 HOXD10P28358 340 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 PTPN7P35236 360 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 TMEM154Q6P9G4 183 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 FRMD5Q7Z6J6 570 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 AGBL1Q96MI9 1066 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 EYA4O95677 639 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 SNRNP35Q16560 246 aaKnown RBP14.35□□□□□ -0.11
COL4A1-201ENST00000375820 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 C2CD6Q53TS8 623 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 MICALL2Q8IY33 904 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 FAM71DQ8N9W8 422 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 ERP27Q96DN0 273 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 SAMD9Q5K651 1589 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
COL4A1-201ENST00000375820 AGRPO00253 132 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 PHF2O75151 1096 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 MAP3K10Q02779 954 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 NARFQ9UHQ1 456 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 PRR36Q9H6K5 1346 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 TCF3P15923 654 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 MDH1P40925 334 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 ATP2C1P98194 919 aaPredicted RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 OLFM3Q96PB7 478 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 DDX39BQ13838 428 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 STAT4Q14765 748 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 GLRA4Q5JXX5 417 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 GPR63Q9BZJ6 419 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 SPASTQ9UBP0 616 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 LSM7Q9UK45 103 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 RASSF10A6NK89 507 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 KCNA3P22001 575 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 VN1R5Q7Z5H4 357 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 FAM84BQ96KN1 310 aaPredicted RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 LCMT1Q9UIC8 334 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 MRPL42Q9Y6G3 142 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
COL4A1-201ENST00000375820 OVGP1Q12889 678 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 MED21Q13503 144 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 CHI3L2Q15782 390 aa14.34□□□□□ -0.11
COL4A1-201ENST00000375820 CEP78Q5JTW2 689 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms