RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 E7ENQ6 273 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 TSHRP16473 764 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 LSP1P33241 339 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 FDFT1P37268 417 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 SLC26A2P50443 739 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 TMEM119Q4V9L6 283 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 CATSPER4Q7RTX7 472 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 ZNF212Q9UDV6 495 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 SLC24A2Q9UI40 661 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 SLC8A2Q9UPR5 921 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 GINS2Q9Y248 185 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 KIAA1551Q9HCM1 1747 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 GOLGA8IPA6NC78 632 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 RARGP13631 454 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 SLCO1A2P46721 670 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 UBXN2AP68543 259 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 MTF1Q14872 753 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 SLC16A10Q8TF71 515 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 ZDHHC15Q96MV8 337 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 KCNK16Q96T55 309 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
PGK1-201ENST00000373316 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.624e-6■□□□□ 10.8
PGK1-201ENST00000373316 NCK2O43639 380 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 COILP38432 576 aaPredicted RBP11.16□□□□□ -0.62
PGK1-201ENST00000373316 IRAK1P51617 712 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
PGK1-201ENST00000373316 RCN2Q14257 317 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 DCAF4L1Q3SXM0 396 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 TTC19Q6DKK2 380 aaPredicted RBP11.16□□□□□ -0.62
PGK1-201ENST00000373316 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 TBC1D1Q86TI0 1168 aaPredicted RBP11.16□□□□□ -0.62
PGK1-201ENST00000373316 PPIL6Q8IXY8 311 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 CALML6Q8TD86 181 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
PGK1-201ENST00000373316 ICAM1P05362 532 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ZNF135P52742 658 aaPredicted RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 NPY5RQ15761 445 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ADRM1Q16186 407 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ANO4Q32M45 955 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 MEI1Q5TIA1 1274 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 NUDCD3Q8IVD9 361 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 GDAP1Q8TB36 358 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ACER1Q8TDN7 264 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 TMBIM4Q9HC24 238 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 MYH1P12882 1939 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 M0QYV0 167 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 MCF2P10911 925 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 OAZ1P54368 228 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 PDK2Q15119 407 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 RARS2Q5T160 578 aaKnown RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 KRT80Q6KB66 452 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 DSTYKQ6XUX3 929 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 SEPT1Q8WYJ6 367 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 FAR2Q96K12 515 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 AGPAT5Q9NUQ2 364 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 KLHL8Q9P2G9 620 aaPredicted RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 CCT8L1PA6NM43 557 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 PRKCBP05771 671 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 CD58P19256 250 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 PRKAA2P54646 552 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 MAPK7Q13164 816 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 ASAP3Q8TDY4 903 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 NIF3L1Q9GZT8 377 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 IL1RAPL1Q9NZN1 696 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 PPARGC1AQ9UBK2 798 aaKnown RBP11.15□□□□□ -0.62
PGK1-201ENST00000373316 NAGPAQ9UK23 515 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 CDK5RAP2Q96SN8 1893 aa11.15□□□□□ -0.62
PGK1-201ENST00000373316 RASSF10A6NK89 507 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 HADHAP40939 763 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 PTGER2P43116 358 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 ARSEP51690 589 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 MYL6P60660 151 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 NAB1Q13506 487 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.63
PGK1-201ENST00000373316 SWSAP1Q6NVH7 229 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 SLC13A5Q86YT5 568 aaPredicted RBP11.15□□□□□ -0.63
PGK1-201ENST00000373316 MAML1Q92585 1016 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 TSC22D3Q99576 134 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 EPAS1Q99814 870 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 PLEKHA5Q9HAU0 1116 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 RBM12Q9NTZ6 932 aaKnown RBP11.15□□□□□ -0.63
PGK1-201ENST00000373316 C10orf71Q711Q0 1435 aa11.15□□□□□ -0.63
PGK1-201ENST00000373316 RRN3P2A6NIE6 340 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms