RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HEATR3Q7Z4Q2 680 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 FAM43AQ8N2R8 423 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 SUPT20HQ8NEM7 779 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 PTCD3Q96EY7 689 aaKnown RBP5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 RHOBTB2Q9BYZ6 727 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 TMEM74BQ9NUR3 256 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 ABCF2Q9UG63 623 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 KAT6AQ92794 2004 aa5.9□□□□□ -1.47
RNU4-28P-201ENST00000364739 E9PLN8 166 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 AKAP10O43572 662 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 ABLIM3O94929 683 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 CT47B1P0C2W7 299 aaPredicted RBP5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 VAV2P52735 878 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 SEC24CP53992 1094 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 MC2RQ01718 297 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 NOGQ13253 232 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 PGS1Q32NB8 556 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 SLC30A10Q6XR72 485 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 TPH2Q8IWU9 490 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 GRAMD1CQ8IYS0 662 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 CFAP52Q8N1V2 620 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 LINC00476Q8WZB0 136 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 TNPO1Q92973 898 aaKnown RBP5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 TMEM125Q96AQ2 219 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 RGMAQ96B86 450 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 LRGUKQ96M69 825 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 VKORC1Q9BQB6 163 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 RTFDC1Q9BY42 306 aaPredicted RBP5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 BRD9Q9H8M2 597 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 CASS4Q9NQ75 786 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 MAN1C1Q9NR34 630 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 TYW1Q9NV66 732 aaKnown RBP5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 CTTNBP2NLQ9P2B4 639 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 AGAP1Q9UPQ3 857 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 ANKRD6Q9Y2G4 727 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 PCDHA1Q9Y5I3 950 aa5.89□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 AHSGP02765 367 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 ALDH2P05091 517 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 GJB1P08034 283 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 HKR1P10072 659 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 GATA3P23771 443 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 PRDX5P30044 214 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 MPLP40238 635 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 HK3P52790 923 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 CCDC157Q569K6 752 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 OLFML1Q6UWY5 402 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 TSHZ1Q6ZSZ6 1077 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 PPP1R3BQ86XI6 285 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 JPH3Q8WXH2 748 aaPredicted RBP5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 MVB12AQ96EY5 273 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 TOR3AQ9H497 397 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 TCF7L1Q9HCS4 588 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 TBCCD1Q9NVR7 557 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZNF180Q9UJW8 692 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 POLHQ9Y253 713 aa5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 THRAP3Q9Y2W1 955 aaKnown RBP5.88□□□□□ -1.47
RNU4-28P-201ENST00000364739 AP1G1O43747 822 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 DTNBO60941 627 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 VPS4BO75351 444 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 SUN1O94901 812 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 NCLP19338 710 aaKnown RBP5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 BMP5P22003 454 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 FDXRP22570 491 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 ADRA1BP35368 520 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 PURAQ00577 322 aaKnown RBP5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 TAP1Q03518 808 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 FPGSQ05932 587 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZNF844Q08AG5 666 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 PIN1Q13526 163 aaPredicted RBP5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 ARMC6Q6NXE6 501 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 FAM90A1Q86YD7 464 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 MED15Q96RN5 788 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 ARMT1Q9H993 441 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 LMBRD1Q9NUN5 540 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 NR2E3Q9Y5X4 410 aa5.87□□□□□ -1.47
RNU4-28P-201ENST00000364739 TRGV11A0A075B6L2 103 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 MYADML2A6NDP7 307 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 H3BUI4 141 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 MYBP10242 640 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 KCNA2P16389 499 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 LPOP22079 712 aaPredicted RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 AKAP5P24588 427 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 AVPR1BP47901 424 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 PTH2RP49190 550 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZNF135P52742 658 aaPredicted RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 SF3B3Q15393 1217 aaKnown RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 IFIT1BQ5T764 474 aaKnown RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 CELF5Q8N6W0 485 aaKnown RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 SLC30A5Q8TAD4 765 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 SSH3Q8TE77 659 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZG16BQ96DA0 208 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 TRIB1Q96RU8 372 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 AIFM2Q9BRQ8 373 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 MRPL46Q9H2W6 279 aaKnown RBP5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 SYNPO2LQ9H987 977 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 ZIM2Q9NZV7 527 aa5.86□□□□□ -1.47
RNU4-28P-201ENST00000364739 MAST3O60307 1309 aa5.85□□□□□ -1.47
RNU4-28P-201ENST00000364739 PRAMEF33A0A0G2JMD5 474 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms