RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SV2CQ496J9 727 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBE3C-201ENST00000348165 PHF2O75151 1096 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 CASP4P49662 377 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 TARSL2A2RTX5 802 aaKnown RBP19.55■□□□□ 0.72
UBE3C-201ENST00000348165 ANP32DO95626 131 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 VCAM1P19320 739 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 SREBF1P36956 1147 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 CYP4A22Q5TCH4 519 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 TRAPPC11Q7Z392 1133 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 CLMNQ96JQ2 1002 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 CYBBP04839 570 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 TMEM253P0C7T8 217 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 RANBP1P43487 201 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 ASAP3Q8TDY4 903 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 ERGIC2Q96RQ1 377 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 AIPL1Q9NZN9 384 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 L3MBTL1Q9Y468 752 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 P4HA2O15460 535 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 CPT1AP50416 773 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 STAT4Q14765 748 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 AMHR2Q16671 573 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 FBXO16Q8IX29 292 aaPredicted RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 CXorf38Q8TB03 319 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 ANGPTL2Q9UKU9 493 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 CST8O60676 142 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 TAL1P17542 331 aaPredicted RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 GTF2A2P52657 109 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 SNRPFP62306 86 aaKnown RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 THEMIS2Q5TEJ8 643 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 SH3KBP1Q96B97 665 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 C17orf75Q9HAS0 396 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 ADARB2Q9NS39 739 aaKnown RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 EEF2KO00418 725 aaKnown RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 PLEKP08567 350 aaPredicted RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 CD44P16070 742 aaKnown RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 CAPRIN1Q14444 709 aaKnown RBP19.54■□□□□ 0.72
UBE3C-201ENST00000348165 KCNB2Q92953 911 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 DYRK4Q9NR20 520 aa19.54■□□□□ 0.72
UBE3C-201ENST00000348165 BYSLQ13895 437 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 GOLGA7BQ2TAP0 167 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 SRLQ86TD4 932 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 ATPAF2Q8N5M1 289 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 SPATA18Q8TC71 538 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 FAM96AQ9H5X1 160 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 FAM205AQ6ZU69 1335 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 IRX1P78414 480 aaPredicted RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 KCNA1Q09470 495 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 COBLL1Q53SF7 1204 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 ANKS1AQ92625 1134 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 CBWD1Q9BRT8 395 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 DRC3Q9H069 523 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 ZC3H7BQ9UGR2 993 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 C1orf131Q8NDD1 294 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 DDX50Q9BQ39 737 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 MTFR1LQ9H019 292 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 NAGPAQ9UK23 515 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 RBP3P10745 1247 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 GUCY1A3Q02108 690 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 DYNC1I2Q13409 638 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 IL31Q6EBC2 164 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 TRABDQ9H4I3 376 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 LSM7Q9UK45 103 aaKnown RBP19.53■□□□□ 0.72
UBE3C-201ENST00000348165 NEU2Q9Y3R4 380 aa19.53■□□□□ 0.72
UBE3C-201ENST00000348165 A0A1W2PQJ5 194 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 THPOP40225 353 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 ORC1Q13415 861 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 TRIM54Q9BYV2 358 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 EHD4Q9H223 541 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 FOXN3O00409 490 aaPredicted RBP19.52■□□□□ 0.72
UBE3C-201ENST00000348165 IL1R1P14778 569 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 ESRRGP62508 458 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 TMEM259Q4ZIN3 620 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 SLC30A10Q6XR72 485 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 SH2D3CQ8N5H7 860 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 ARHGEF26Q96DR7 871 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 TMEM247A6NEH6 219 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 KIZQ2M2Z5 673 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 C2CD6Q53TS8 623 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 NLRP14Q86W24 1093 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 DCP1BQ8IZD4 617 aaKnown RBP19.52■□□□□ 0.72
UBE3C-201ENST00000348165 TRIM33Q9UPN9 1127 aa19.52■□□□□ 0.72
UBE3C-201ENST00000348165 CFAP69A5D8W1 941 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 OGTO15294 1046 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 IRF1P10914 325 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 NPTX2P47972 431 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 TAF6P49848 677 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 DDIASQ8IXT1 998 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 MTIF3Q9H2K0 278 aaKnown RBP19.52■□□□□ 0.71
UBE3C-201ENST00000348165 CYP4F11Q9HBI6 524 aa19.52■□□□□ 0.71
UBE3C-201ENST00000348165 METTL5Q9NRN9 209 aaKnown RBP19.52■□□□□ 0.71
UBE3C-201ENST00000348165 NCAM1P13591 858 aa19.51■□□□□ 0.71
UBE3C-201ENST00000348165 EPHX2P34913 555 aa19.51■□□□□ 0.71
UBE3C-201ENST00000348165 ACTN3Q08043 901 aaPredicted RBP19.51■□□□□ 0.71
UBE3C-201ENST00000348165 YAF2Q8IY57 180 aa19.51■□□□□ 0.71
UBE3C-201ENST00000348165 AKT1S1Q96B36 256 aa19.51■□□□□ 0.71
UBE3C-201ENST00000348165 ACSF2Q96CM8 615 aaPredicted RBP19.51■□□□□ 0.71
UBE3C-201ENST00000348165 CELF4Q9BZC1 486 aaKnown RBP19.51■□□□□ 0.71
UBE3C-201ENST00000348165 XPO7Q9UIA9 1087 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms