RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 NXF1Q9UBU9 619 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PALD1Q9ULE6 856 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 KIAA0100Q14667 2235 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ERBB4Q15303 1308 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF318Q5VUA4 2279 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PSAPP07602 524 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 GYS1P13807 737 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PAX7P23759 505 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PRKG1Q13976 671 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PIGOQ8TEQ8 1089 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 EFHD2Q96C19 240 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 RIMBP2O15034 1052 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 TLR2O60603 784 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 FKBP6O75344 327 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 MLNP12872 115 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 CUL4AQ13619 759 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC157Q569K6 752 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 CACHD1Q5VU97 1274 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 MOSPD2Q8NHP6 518 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF507Q8TCN5 953 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 FRMD8Q9BZ67 464 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 TRIM49BA6NDI0 452 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 SUPT3HB4E1H0 165 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 TRIM49D1C9J1S8 452 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 TTLL1O95922 423 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ANXA11P50995 505 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 AKR1D1P51857 326 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ACLYP53396 1101 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ICA1Q05084 483 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 DCAF15Q66K64 600 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 GRAMD1CQ8IYS0 662 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 REXO4Q9GZR2 422 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ING4Q9UNL4 249 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 NEMP1O14524 444 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 SLC20A2Q08357 652 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 MTHFSDQ2M296 383 aaKnown RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 B3GNT6Q6ZMB0 384 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 SETD9Q8NE22 299 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF184Q99676 751 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ADGRG1Q9Y653 693 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 RESTQ13127 1097 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF667Q5HYK9 610 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 RCOR2Q8IZ40 523 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.45□□□□□ -1.38
CSMD1-201ENST00000335551 ACAD9Q9H845 621 aa6.45□□□□□ -1.38
CSMD1-201ENST00000335551 PNMA6EA0A0J9YXQ4 647 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PSMD3O43242 534 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NPR3P17342 541 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ITIH2P19823 946 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ZNF200P98182 395 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MFSD14BQ5SR56 506 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TSHZ1Q6ZSZ6 1077 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CYP4Z2PQ8N1L4 340 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 A0A087WXM4 84 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 LSM1O15116 133 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 RAD51BO15315 384 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 P4HA2O15460 535 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PEX1O43933 1283 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 IFNA14P01570 189 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ATP1A1P05023 1023 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ALAS1P13196 640 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ZSCAN20P17040 1043 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TMEM270Q6UE05 265 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SCARA5Q6ZMJ2 495 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ALG13Q9NP73 1137 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PARVAQ9NVD7 372 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PHGDHO43175 533 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MAPK11Q15759 364 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NDUFAF6Q330K2 333 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NLRP10Q86W26 655 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 FAM9CQ8IZT9 166 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 WBP11Q9Y2W2 641 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MAPK1P28482 360 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TTKP33981 857 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TAS2R42Q7RTR8 314 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 RBBP8NLQ8NC74 664 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 HES6Q96HZ4 224 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NMRK1Q9NWW6 199 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 C15orf41Q9Y2V0 281 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TRIM43BA6NCK2 446 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PIK3CDO00329 1044 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CLIC2O15247 247 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ALOX5P09917 674 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NFIL3Q16649 462 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 IZUMO2Q6UXV1 221 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CHMP1BQ7LBR1 199 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ECSITQ9BQ95 431 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 NDFIP2Q9NV92 336 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 THRAP3Q9Y2W1 955 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 A0A1W2PQC6 194 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 FAM83BQ5T0W9 1011 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 THEMIS2Q5TEJ8 643 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 THOC7Q6I9Y2 204 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TRIM65Q6PJ69 517 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 IFNEQ86WN2 208 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CMTR1Q8N1G2 835 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 KLHL23Q8NBE8 558 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms