RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MAPTP10636 758 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PABPC1P11940 636 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 HOXD13P35453 343 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PMS1P54277 932 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CYP27A1Q02318 531 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GHRHRQ02643 423 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ACVR2BQ13705 512 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GRM2Q14416 872 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 RASA2Q15283 850 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CNGA2Q16280 664 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CYP1B1Q16678 543 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SLC35G1Q2M3R5 365 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 HSP90AA5PQ58FG0 334 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ANKRD40Q6AI12 368 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TWF2Q6IBS0 349 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 MFSD5Q6N075 450 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ECHDC2Q86YB7 292 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 LSMEM2Q8N112 164 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 MIGA1Q8NAN2 632 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 OR7G1Q8NGA0 311 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 LRRC15Q8TF66 581 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 EFHD2Q96C19 240 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 DNAJC19Q96DA6 116 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 EGLN2Q96KS0 407 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PNMA5Q96PV4 448 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PHF12Q96QT6 1004 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TCF12Q99081 682 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 B3GNT4Q9C0J1 378 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 NEUROG2Q9H2A3 272 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 KCTD10Q9H3F6 313 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PLGRKTQ9HBL7 147 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 IL17RBQ9NRM6 502 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GID8Q9NWU2 228 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 DOCK5Q9H7D0 1870 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 LINC00854A0A1B0GVQ3 168 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 KLRG2A4D1S0 409 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ALAS1P13196 640 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 DDX5P17844 614 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 FKBP3Q00688 224 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GABPAQ06546 454 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 IZUMO2Q6UXV1 221 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SLC9A9Q8IVB4 645 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 C12orf56Q8IXR9 622 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SUN5Q8TC36 379 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PYROXD1Q8WU10 500 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 MED30Q96HR3 178 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PRICKLE1Q96MT3 831 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TSG101Q99816 390 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ECSITQ9BQ95 431 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 IFIH1Q9BYX4 1025 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 KIAA1683Q9H0B3 1180 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ASAP1Q9ULH1 1129 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 MINPP1Q9UNW1 487 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 UTP11Q9Y3A2 253 aaKnown RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ARID2Q68CP9 1835 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GOLGA8CPA6NN73 597 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TRAFD1O14545 582 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-201ENST00000316433 NDC80O14777 642 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PRKAB2O43741 272 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ZNF862O60290 1169 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PEX14O75381 377 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 EYA4O95677 639 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 HMOX2P30519 316 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ETV3P41162 512 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 GSSP48637 474 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 PCSK7Q16549 785 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SLC9C1Q4G0N8 1177 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ACSBG2Q5FVE4 666 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SPOPLQ6IQ16 392 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 RFWD3Q6PCD5 774 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CCDC81Q6ZN84 652 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 RFPL4BQ6ZWI9 263 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SLC30A5Q8TAD4 765 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 DTX3LQ8TDB6 740 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 STMN2Q93045 179 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 ERP27Q96DN0 273 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CALML4Q96GE6 196 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 HES6Q96HZ4 224 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TRIM47Q96LD4 638 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 C8orf48Q96LL4 319 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 NUP85Q9BW27 656 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 SNX25Q9H3E2 840 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TLE6Q9H808 572 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 CNGB3Q9NQW8 809 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 COL4A3BPQ9Y5P4 624 aa7.02□□□□□ -1.29
ZNF540-201ENST00000316433 TAF1P21675 1872 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 XPOTO43592 962 aaKnown RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 EDIL3O43854 480 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 TSPAN1O60635 241 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 B3GALNT1O75752 331 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 S100BP04271 92 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-201ENST00000316433 PLCG1P19174 1290 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CIITAP33076 1130 aa7.01□□□□□ -1.29
ZNF540-201ENST00000316433 CETN2P41208 172 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 289.9 ms