RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 EPS15L1Q9UBC2 864 aa12.22□□□□□ -0.45
CLCC1-201ENST00000302500 RAPGEFL1Q9UHV5 662 aa12.22□□□□□ -0.45
CLCC1-201ENST00000302500 SIX4Q9UIU6 781 aa12.22□□□□□ -0.45
CLCC1-201ENST00000302500 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
CLCC1-201ENST00000302500 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
CLCC1-201ENST00000302500 UBE4BO95155 1302 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 ANHXE9PGG2 379 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 TRAPPC3O43617 180 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 EXTL3O43909 919 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 C8AP07357 584 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 HSP90AA1P07900 732 aaKnown RBP12.21□□□□□ -0.45
CLCC1-201ENST00000302500 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLCC1-201ENST00000302500 ALADP13716 330 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 IDEP14735 1019 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 ATF2P15336 505 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 TYMPP19971 482 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 STK4Q13043 487 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 UVSSAQ2YD98 709 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 FAM26FQ5R3K3 315 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 NT5DC4Q86YG4 428 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 TCEAL8Q8IYN2 117 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 ENGASEQ8NFI3 743 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 OR10T2Q8NGX3 314 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 PLEKHO2Q8TD55 490 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 PKMYT1Q99640 499 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 KCTD10Q9H3F6 313 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 AGPAT3Q9NRZ7 376 aa12.21□□□□□ -0.45
CLCC1-201ENST00000302500 MOSPD3O75425 235 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 CA8P35219 290 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 EPHA5P54756 1037 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 CLDN10P78369 228 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 KRT85P78386 507 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 DPYDQ12882 1025 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM132DQ14C87 1099 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 POSTNQ15063 836 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 PRSS36Q5K4E3 855 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 TRIM67Q6ZTA4 783 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 CBWD2Q8IUF1 395 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 FAM213AQ9BRX8 229 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 DMAC2Q9NW81 257 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 HCFC1R1Q9NWW0 138 aa12.2□□□□□ -0.46
CLCC1-201ENST00000302500 DNMT3BQ9UBC3 853 aaKnown RBP12.2□□□□□ -0.46
CLCC1-201ENST00000302500 NUP210Q8TEM1 1887 aaPredicted RBP12.2□□□□□ -0.46
CLCC1-201ENST00000302500 IL18RAPO95256 599 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 ASGR2P07307 311 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
CLCC1-201ENST00000302500 CCR2P41597 374 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 ASIC1P78348 528 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 NTHL1P78549 312 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 FMR1NBQ8N0W7 255 aaPredicted RBP12.19□□□□□ -0.46
CLCC1-201ENST00000302500 GPD1LQ8N335 351 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 OR5B17Q8NGF7 314 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SLC7A14Q8TBB6 771 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SMG7Q92540 1137 aaKnown RBP12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SENP8Q96LD8 212 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 TMEM209Q96SK2 561 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 HSPBP1Q9NZL4 362 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 EXOC7Q9UPT5 735 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 NR2E1Q9Y466 385 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 NME7Q9Y5B8 376 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 TIMM13Q9Y5L4 95 aaPredicted RBP12.19□□□□□ -0.46
CLCC1-201ENST00000302500 ANAPC1Q9H1A4 1944 aa12.19□□□□□ -0.46
CLCC1-201ENST00000302500 GOLGA8IPA6NC78 632 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 GOLGA8JA6NMD2 632 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 KIAA0391O15091 583 aaKnown RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 LDHAP00338 332 aaKnown RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 PAX3P23760 479 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 MCM4P33991 863 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 AFMP43652 599 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 SNRPFP62306 86 aaKnown RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 AMPD3Q01432 767 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 SIGLEC14Q08ET2 396 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 HTR4Q13639 388 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 KMT5BQ4FZB7 885 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 GRASPQ7Z6J2 395 aaPredicted RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 LRRTM3Q86VH5 581 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 TMC8Q8IU68 726 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 TDRD5Q8NAT2 981 aaKnown RBP12.18□□□□□ -0.46
CLCC1-201ENST00000302500 ITFG1Q8TB96 612 aa12.18□□□□□ -0.46
CLCC1-201ENST00000302500 ZNF516Q92618 1163 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms